FC931427

Overview
NameFC931427
Unique NameFC931427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:232..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METMA (Adenosylhomocysteinase OS=Methanosarcina mazei GN=ahcY PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19
Identity = 67/209 (32.06%), Postives = 92/209 (44.02%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWK-GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYG 626
            MP L   R +F   +P KG K+  +LH+  +TAVL+ETL A GA+V    CN  STQD                K G    EY+   ++ LD      PD+ +DDG D    +H                                         K+  +M  +++G  EETTTGV R + M+++G L  P I VND++TK  FDN YG
Sbjct:   21 MPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVAAALDTRENINCFAKYGCCTGEYYEAIDRVLDI----EPDITIDDGADLIFKLH-----------------------------------------KERQEMLAKILGGCEETTTGVHRLHAMEKDGALKMPVIAVNDAMTKYLFDNRYG 184          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_SULSO (Adenosylhomocysteinase OS=Sulfolobus solfataricus GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.500e-18
Identity = 65/208 (31.25%), Postives = 87/208 (41.83%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYG 626
            MP LM  R  F   +P KG  I+  LH+T +TA L++TL   GA V     N  STQD               WKGE   EY+   E  +       P++++DDG D    IHE V +                                          K  + G +EETTTGV R   M+++G L +P + VN++ TK  FDN YG
Sbjct:   25 MPTLMEIRKRFKAEKPLKGINISAVLHVTKETAALVKTLKIGGANVALAGSNPLSTQDDVAAALVEEGISVFAWKGENETEYYSNIESIVKIHE---PNIVMDDGADLHAYIHEKVSS------------------------------------------KLDIYGGTEETTTGVIRLKAMEKDGVLKYPLVAVNNAYTKYLFDNRYG 187          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_AQUAE (Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17
Identity = 66/209 (31.58%), Postives = 87/209 (41.63%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXW-KGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYG 626
            MP L   R  F   +P KG KI+  LH+T +TA L+ TL   GAEV   + N  STQD                 +GE  + Y+      ++      PD+++DDG D    +H                                         K+Y  + E+++G  EETTTGV R   M E G L FP I VND+ TK  FDN YG
Sbjct:   25 MPVLRQIRERFSKEKPLKGKKISACLHVTTETANLMRTLKEGGAEVYLTASNPLSTQDDVAAALVKYFEIPVFAIRGEDRETYYKHLRAVIE----KEPDVVIDDGADLISTLH-----------------------------------------KEYPGLAEKVLGGMEETTTGVIRLRAMAEQGVLKFPIIAVNDAYTKHMFDNRYG 188          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_CYAP7 (Adenosylhomocysteinase OS=Cyanothece sp. (strain PCC 7424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14
Identity = 64/209 (30.62%), Postives = 89/209 (42.58%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXW-KGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYG 626
            MP +   +  F   +PF+G ++    H+T +TA L   L A GA+    + N  STQD                 KGE    Y    + ALD  P    +LI+DDGGD T  +        I E+  ++ D                                 ++G +EETTTG+ R   M ++G L FPA+NVND+ TK  FDN YG
Sbjct:   36 MPVVKQIKDRFEKEKPFEGIRLIACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAACLVADYGIPVFAIKGEDNATYHRHVQIALDHKP----NLIIDDGGDVTATL--------IQERKDQIAD---------------------------------IIGTTEETTTGIVRLAAMLKDGVLSFPAMNVNDADTKHFFDNRYG 199          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_THEEB (Adenosylhomocysteinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14
Identity = 64/209 (30.62%), Postives = 89/209 (42.58%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXX-WKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYG 626
            MP L   R  F   +PF G ++    H+T +TA L   L A GA+    + N  STQD                 KGE    Y      ALD  P    ++I+DDG D                                 +V T++++       + H++ + ++G +EETTTG+ R   M  +G L FPAINVND+ TK  FDN YG
Sbjct:   36 MPVLRQIRDRFEKEKPFAGIRLAACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAASLVVNYGIPVFAQKGEDTATYMRHVNIALDHRP----NIIIDDGCD---------------------------------VVATLVKE-------RQHQISD-IIGTTEETTTGIVRLKAMFRDGVLTFPAINVNDADTKHFFDNRYG 199          
The following BLAST results are available for this feature:
BLAST of FC931427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_METMA4.134e-1932.06Adenosylhomocysteinase OS=Methanosarcina mazei GN=... [more]
SAHH_SULSO3.500e-1831.25Adenosylhomocysteinase OS=Sulfolobus solfataricus ... [more]
SAHH_AQUAE2.268e-1731.58Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY... [more]
SAHH_CYAP71.054e-1430.62Adenosylhomocysteinase OS=Cyanothece sp. (strain P... [more]
SAHH_THEEB1.376e-1430.62Adenosylhomocysteinase OS=Thermosynechococcus elon... [more]

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Properties
Property NameValue
Genbank descriptionC34105A04EF PostHarvP1 Citrus clementina cDNA clone C34105A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931427 ID=FC931427; Name=FC931427; organism=Citrus clementina; type=EST; length=640bp
AAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCC
TTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGC
CGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCT
CCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGT
GACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTG
GTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATC
TCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTC
AAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTC
CACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGT
TGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGT
GTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTTTATCAGATGCAAGA
AAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCA
AGAGCAAGTTTGATAACTTGTATGGATGCCGCACTCGCTC
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