FC931427

Overview
NameFC931427
Unique NameFC931427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:232..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.366e-61
Identity = 123/211 (58.29%), Postives = 145/211 (68.72%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL +YW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  PAS    E ++   +++  LK  PK Y   +   + GVSEETTTGV R Y MQ+ GTLL+PAINVNDSVTKSKFDNLYGCR
Sbjct:   32 MPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLADYWDYTAKLFDWHGGGHPNMILDDGGDATMYVHLGLRAEN--GDTAFLDKPAS---EEEEVFFALLKKQLKEKPKGYFAAIAASIKGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCR 237          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.270e-60
Identity = 118/219 (53.88%), Postives = 143/219 (65.30%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXX---------WKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM  R  +  S+P KG +I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQD                        WKGETL EYW  T +AL W  G GP  +VDDGGDATLLI +G +    +E  G +P+P   DN E++ VL  ++     D   +H +   + GVSEETTTGV R YQ+++ G LLFPAINVND+VTKSKFDN+YGCR
Sbjct:   35 MPGLMVLRERYSASKPLKGVRISGSLHMTVQTAVLIETLTALGADVRWASCNIFSTQDTAAAAIVVGPTGTPEKPAGIPVFAWKGETLPEYWENTYRALTWPDGQGPQQVVDDGGDATLLISKGFE----FETAGAVPEPTEADNLEYRCVLATLKQVFNQDKNHWHTVAAGMNGVSEETTTGVHRLYQLEKEGKLLFPAINVNDAVTKSKFDNIYGCR 249          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.270e-60
Identity = 118/210 (56.19%), Postives = 141/210 (67.14%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R ++   +P  G +ITGSLHMTIQTAVLIETL  LGA VRW SCNIFSTQDH              WKGE+L+EYWWCT +A+    G GP L+VDDGGD TLLIH+G + E      G       + + E +++  +++     DP+++HKM     GVSEETTTGV R Y+MQE G LL PAINVNDSVTKSKFDNLYGCR
Sbjct:   35 MPGLMAIRRKYAKEKPLAGVRITGSLHMTIQTAVLIETLVDLGASVRWASCNIFSTQDHAAAAIAKAGVPVFAWKGESLEEYWWCTLQAVTHPGGKGPQLVVDDGGDVTLLIHKGYELE-----NGSDWVNTPSGSHEEKVIKDLLKQVHAEDPQRWHKMVAEWRGVSEETTTGVHRLYKMQEQGKLLVPAINVNDSVTKSKFDNLYGCR 239          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.270e-60
Identity = 121/211 (57.35%), Postives = 146/211 (69.19%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNI+STQDH               KGE+L++YW  T +  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P S +     I   +++  LK  PK Y  ++ + + GVSEETTTGV R Y MQ+ GTLL+PAINVNDSVTKSKFDNLYGCR
Sbjct:   30 MPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAEN--GDTAFLDKPGSDEEV---IFFALLKKQLKEKPKGYFAEIAKNIRGVSEETTTGVHRLYDMQKAGTLLWPAINVNDSVTKSKFDNLYGCR 235          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.270e-60
Identity = 120/220 (54.55%), Postives = 147/220 (66.82%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV R YQ  E G L FPAINVNDSVTKSKFDN YG R
Sbjct:   40 MPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEETTTGVLRLYQFAEAGDLAFPAINVNDSVTKSKFDNKYGTR 255          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.659e-60
Identity = 121/210 (57.62%), Postives = 141/210 (67.14%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+LQEYW  T +  +W  GG P++I+DDGGDATLL+H G KAE   +    L  P S +      +   I++ L  D   Y +  + + GV+EETTTGV R YQM + G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAFKGESLQEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAE---KDVSVLAHPGSEEET---FLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCR 236          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RALEJ (Adenosylhomocysteinase OS=Ralstonia eutropha (strain JMP134) GN=ahcY PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.167e-60
Identity = 120/210 (57.14%), Postives = 142/210 (67.62%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  DW  GG P++I+DDGGDATLL+H G KAE   +    + +P S +      +   I++ L  DP  Y +    + GV+EETTTGV R YQM + G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWVDGGTPNMILDDGGDATLLLHLGAKAE---KDASLIANPGSEEET---FLFAAIKEKLAKDPSWYSRNLAAIRGVTEETTTGVHRLYQMAQKGDLKFPAINVNDSVTKSKFDNLYGCR 236          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.830e-60
Identity = 119/210 (56.67%), Postives = 142/210 (67.62%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  DW  GG P++I+DDGGDATLL+H G +AE   +    + +P S +      +   I++ L  DP  Y +    + GV+EETTTGV R YQM + G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWADGGTPNMILDDGGDATLLLHLGARAE---KDQSVIANPGSEEET---FLFAAIKEKLAKDPSWYSRNLAAIRGVTEETTTGVHRLYQMAQKGELRFPAINVNDSVTKSKFDNLYGCR 236          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RALEH (Adenosylhomocysteinase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ahcY PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.696e-60
Identity = 119/210 (56.67%), Postives = 139/210 (66.19%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  DW  GG P++I+DDGGDATLL+H G +AE+      K      T       +   I++ L  DP  Y +    + GV+EETTTGV R YQM + G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWADGGTPNMILDDGGDATLLLHLGARAEKDQSVIAKATSEEET------YLFAAIKEKLAKDPSWYSRNLAAIRGVTEETTTGVHRLYQMAQKGELRFPAINVNDSVTKSKFDNLYGCR 236          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 4.827e-60
Identity = 121/210 (57.62%), Postives = 144/210 (68.57%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMACRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L DP S    E +I+   I+  LKA P  + K ++ + GV+EETTTGV R YQ+ + G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMACRAEFGETKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVYAIKGESLEDYWIYTDKIFQWADGGFSNMILDDGGDATMYILLGARAE---AGEDVLSDPHS---EEEEILFAQIKKRLKASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDSVTKSKFDNKYGCK 232          
The following BLAST results are available for this feature:
BLAST of FC931427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_BRASB4.366e-6158.29Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_TRIVA1.270e-6053.88Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_SOLUE1.270e-6056.19Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]
SAHH_RHOP21.270e-6057.35Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_MYCUA1.270e-6054.55Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_RALPJ1.659e-6057.62Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_RALEJ2.167e-6057.14Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_CUPTR2.830e-6056.67Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]
SAHH_RALEH3.696e-6056.67Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_AGRRK4.827e-6057.62Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34105A04EF PostHarvP1 Citrus clementina cDNA clone C34105A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931427 ID=FC931427; Name=FC931427; organism=Citrus clementina; type=EST; length=640bp
AAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCC
TTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGC
CGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCT
CCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGT
GACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTG
GTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATC
TCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTC
AAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTC
CACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGT
TGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGT
GTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTTTATCAGATGCAAGA
AAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCA
AGAGCAAGTTTGATAACTTGTATGGATGCCGCACTCGCTC
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