FC931427

Overview
NameFC931427
Unique NameFC931427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:232..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.086e-59
Identity = 123/210 (58.57%), Postives = 140/210 (66.67%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH               KGE+L +YW  T +  +W  GG  ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   IR  L +DP  Y      + GV+EETTTGV R YQM E G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFEWRDGGYSNMILDDGGDATLLLHLGARAE---KDVSVLAKPGS---EEERVLFAAIRAKLASDPTWYSVRLAAIRGVTEETTTGVHRLYQMFERGELKFPAINVNDSVTKSKFDNLYGCR 236          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.337e-59
Identity = 120/210 (57.14%), Postives = 143/210 (68.10%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH               KGETL+EYW  T   L+WG GG P++I+DDGGDAT L+  G KAE   +    L +P+   N E   +   I+  L  D   Y ++K  + GV+EETTTGV R Y+MQ++G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   39 MPGLMALRAKYGKDKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAMAAGGIPVFAVKGETLEEYWDYTHSILEWGDGGTPNMILDDGGDATGLVMLGSKAE---QDITVLDNPS---NEEETFLFASIKKKLAKDSSFYSRIKAEIQGVTEETTTGVARLYKMQKSGELPFPAINVNDSVTKSKFDNLYGCR 242          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.337e-59
Identity = 118/211 (55.92%), Postives = 144/211 (68.25%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   PK +   + + + GVSEETTTGV R Y + + G LLFPAINVNDSVTKSKFDNLYGC+
Sbjct:   29 MPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCK 234          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.337e-59
Identity = 118/211 (55.92%), Postives = 144/211 (68.25%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   PK +   + + + GVSEETTTGV R Y + + G LLFPAINVNDSVTKSKFDNLYGC+
Sbjct:   29 MPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCK 234          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BORPA (Adenosylhomocysteinase OS=Bordetella parapertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.337e-59
Identity = 120/210 (57.14%), Postives = 139/210 (66.19%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   I++ L  DPK Y     ++ GV+EETTTGV R YQM + G L F AINVNDSVTKSKFDNLYGCR
Sbjct:   34 MPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDISVLAKPGS---EEERVLFAAIKETLARDPKWYSTRLAQIKGVTEETTTGVHRLYQMSQKGELAFAAINVNDSVTKSKFDNLYGCR 237          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BORBR (Adenosylhomocysteinase OS=Bordetella bronchiseptica GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.337e-59
Identity = 120/210 (57.14%), Postives = 139/210 (66.19%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   I++ L  DPK Y     ++ GV+EETTTGV R YQM + G L F AINVNDSVTKSKFDNLYGCR
Sbjct:   34 MPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDISVLAKPGS---EEERVLFAAIKETLARDPKWYSTRLAQIKGVTEETTTGVHRLYQMSQKGELAFAAINVNDSVTKSKFDNLYGCR 237          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BORPE (Adenosylhomocysteinase OS=Bordetella pertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.970e-59
Identity = 120/210 (57.14%), Postives = 139/210 (66.19%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   I++ L  DPK Y     ++ GV+EETTTGV R YQM + G L F AINVNDSVTKSKFDNLYGCR
Sbjct:   34 MPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDISVLAKPGS---EEERVLFAAIKETLGRDPKWYSTRLAQIKGVTEETTTGVHRLYQMSQKGELAFAAINVNDSVTKSKFDNLYGCR 237          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.104e-59
Identity = 117/219 (53.42%), Postives = 146/219 (66.67%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P   +  +AE+++ L ++R+  + D  K+  + E + GV+EETTTGV R YQ    G L+FPAINVNDSVTKSKFDN YG R
Sbjct:   44 MPGLMALRREYADVQPLKGARISGSLHMTVQTAVLIETLTALGAQVRWASCNIFSTQDHAAAAVVVGPHGTVEEPKGVSVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPEDADHSAEYKVFLNLLRERFETDRGKWTAIAESVRGVTEETTTGVLRLYQFAAAGELVFPAINVNDSVTKSKFDNKYGTR 257          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.104e-59
Identity = 119/220 (54.09%), Postives = 145/220 (65.91%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  GV+    YEK G +P     D+AE+++ L ++R   + D  K+ K+ + + GV+EETTTGV R YQ    G L FPAINVNDSVTKSKFDN YG R
Sbjct:   40 MPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPYGTPEEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPVNMILDDGGDATMLVLRGVQ----YEKAGVVPPAEVDDSAEWKVFLNLLRKRFETDKGKWTKIAKSVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTR 255          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.104e-59
Identity = 119/220 (54.09%), Postives = 145/220 (65.91%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  GV+    YEK G +P     D+AE+++ L ++R   + D  K+ K+ + + GV+EETTTGV R YQ    G L FPAINVNDSVTKSKFDN YG R
Sbjct:   40 MPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPYGTPEEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPVNMILDDGGDATMLVLRGVQ----YEKAGVVPPAEVDDSAEWKVFLNLLRKRFETDKGKWTKIAKSVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTR 255          
The following BLAST results are available for this feature:
BLAST of FC931427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_AZOSE4.086e-5958.57Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_SYNS35.337e-5957.14Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_METEP5.337e-5955.92Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC45.337e-5955.92Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_BORPA5.337e-5957.14Adenosylhomocysteinase OS=Bordetella parapertussis... [more]
SAHH_BORBR5.337e-5957.14Adenosylhomocysteinase OS=Bordetella bronchiseptic... [more]
SAHH_BORPE6.970e-5957.14Adenosylhomocysteinase OS=Bordetella pertussis GN=... [more]
SAHH_NOCFA9.104e-5953.42Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_MYCLE9.104e-5954.09Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB9.104e-5954.09Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]

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Properties
Property NameValue
Genbank descriptionC34105A04EF PostHarvP1 Citrus clementina cDNA clone C34105A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931427 ID=FC931427; Name=FC931427; organism=Citrus clementina; type=EST; length=640bp
AAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCC
TTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGC
CGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCT
CCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGT
GACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTG
GTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATC
TCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTC
AAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTC
CACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGT
TGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGT
GTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTTTATCAGATGCAAGA
AAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCA
AGAGCAAGTTTGATAACTTGTATGGATGCCGCACTCGCTC
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