FC931427

Overview
NameFC931427
Unique NameFC931427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:232..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.189e-58
Identity = 118/211 (55.92%), Postives = 143/211 (67.77%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA RAE+G SQP KGAKI GSLHMTIQTAVLIETL  LGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   PK +   + + + GVSEETTTGV R Y + + G LLFPAINVNDSVTKSKFDNLYGC+
Sbjct:   29 MPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKHLGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCK 234          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.189e-58
Identity = 120/210 (57.14%), Postives = 140/210 (66.67%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EFGPSQP KGA+I GSLHMTIQTAVLI+TL ALGA+VRW SCNI+STQDH              +KGETL+EYW  T++   W  G GP+LI+DDGGDAT+ +  G KAE        L  P S +   F      I+  L A P  + K K  + GVSEETTTGV R YQ+++ G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   32 MPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYSTQDHAAAAIADAGTAVFAYKGETLEEYWDYTDRMFQWPDGEGPNLILDDGGDATMYLILGEKAE---SDPSFLEKPTSEEEKYF---FAQIKKRLTASPGWFKKTKAGVRGVSEETTTGVNRLYQLEKRGELPFPAINVNDSVTKSKFDNKYGCK 235          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.553e-58
Identity = 120/210 (57.14%), Postives = 138/210 (65.71%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T +  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   I+  L  DPK Y     ++ GV+EETTTGV R YQM + G L F AINVNDSVTKSKFDNLYGCR
Sbjct:   34 MPGLMAIREEFAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWQYTHRIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDASVLAKPGS---EEERVLFAAIKATLARDPKWYSTRLAQIRGVTEETTTGVHRLYQMAQKGELAFAAINVNDSVTKSKFDNLYGCR 237          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.553e-58
Identity = 120/214 (56.07%), Postives = 145/214 (67.76%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGE+L++YW  T +  D+G    PG GP++I+DDGGDATLL+H G +AE+       L   A+  + E +I+   I+  +  DP  Y +    ++GV+EETTTGV R  +M   GTLLF AINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEK------DLSVVANPTSEEERILFAAIKAKIAQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR 240          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.028e-58
Identity = 119/210 (56.67%), Postives = 142/210 (67.62%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH               KGETL+EYW  T + L+W  GG P++I+DDGGDAT L+  G KAE   +    L +P+   N E   +   I+  L  D   Y + K  + GV+EETTTGV R Y+MQ++G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   39 MPGLMALRAKYGNEKPLKGARIAGSLHMTIQTAVLIETLEELGADVRWASCNIFSTQDHAAAAIAANGTPVFAVKGETLEEYWAYTHRILEWSDGGAPNMILDDGGDATGLVILGTKAE---QDITVLDNPS---NEEETFLFASIKKKLAEDSSFYSRTKAAIQGVTEETTTGVARLYKMQKSGELPFPAINVNDSVTKSKFDNLYGCR 242          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.028e-58
Identity = 122/213 (57.28%), Postives = 140/213 (65.73%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA---STDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA RAE+GP Q  KGA+I GSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH              +KGE L EYW    K  +W  GG P+LI+DDGGDATLL   G KAE+         DP+   +  N E + +  +++  L   P  Y  ++  + GVSEETTTGV R YQM +   L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   26 MPGLMATRAEYGPQQILKGARIAGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAFKGENLVEYWEYAHKIFEWHDGGYPNLILDDGGDATLLCVLGPKAEK---------DPSILNNPQNEEEEALYAVMKKYLAEKPGFYSAIRAAIGGVSEETTTGVHRLYQMAQKDELPFPAINVNDSVTKSKFDNLYGCR 229          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_VARPS (Adenosylhomocysteinase OS=Variovorax paradoxus (strain S110) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.649e-58
Identity = 123/214 (57.48%), Postives = 143/214 (66.82%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA VRW SCNIFSTQDH               KGE+L++YW  T    D+GP    G GP++I+DDGGDATLL+H G +AE   +  G L  P S    E +I+   I+  L  DP  Y +    ++GV+EETTTGV R  +M   GTLLF AINVNDSVTKSKFDNLYGCR
Sbjct:   37 MPGLMAIREEFSKAQPLKGARITGSLHMTIQTAVLIETLQALGATVRWASCNIFSTQDHAAAAIAAAGTPVFAIKGESLKDYWDYTHAIFDFGPKGSQGEGPNMILDDGGDATLLMHLGQRAE---KDLGVLSKPTS---EEERILYAAIKAKLAVDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR 244          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.649e-58
Identity = 118/210 (56.19%), Postives = 143/210 (68.10%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L +P S    E +I+   I+  L A P  + K ++ + GV+EETTTGV R YQ+ + G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMSCRAEFGEAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE---AGEDVLSNPHS---EEEEILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDSVTKSKFDNKYGCK 232          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_PROM4 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.649e-58
Identity = 120/210 (57.14%), Postives = 141/210 (67.14%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T + L+WG    P++I+DDGGDAT L+  G KAE+       L      +N E   + + IR+ L  DP  Y ++K  + GV+EETTTGV R YQMQ NG+L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   39 MPGLMALREKYHKEKPLKGARIAGSLHMTIQTAVLIETLVALGAQVRWASCNIFSTQDHAAAAIASSGIPVFAKKGETLDEYWAYTHRILEWGDQETPNMILDDGGDATGLVILGSKAEQ------DLSVLERPNNEEEIALYSSIRNKLSDDPSFYSRIKSSIQGVTEETTTGVARLYQMQANGSLPFPAINVNDSVTKSKFDNLYGCR 242          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.649e-58
Identity = 119/210 (56.67%), Postives = 140/210 (66.67%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGL+A R EF   QP +GA+ITGSLHMTIQTAVLIETL ALGAEV+W SCNIFSTQDH               KGETL++YW  T +  +W  GG  ++I+DDGGDATLL+H G +AE   +    L +P S +     I+   I+  L  DP  Y    E++ GV+EETTTGV R YQM   G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   37 MPGLIAIRDEFAAQQPLRGARITGSLHMTIQTAVLIETLEALGAEVQWASCNIFSTQDHAAAAIAANGTPVFAIKGETLEQYWDFTHRIFEWADGGYTNMILDDGGDATLLLHLGARAE---KDQACLNNPTSEEET---ILFAAIKKKLAQDPTWYSTRLEKVKGVTEETTTGVHRLYQMFAKGELKFPAINVNDSVTKSKFDNLYGCR 240          
The following BLAST results are available for this feature:
BLAST of FC931427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_METPB1.189e-5855.92Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_HYPNA1.189e-5857.14Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_BORPD1.553e-5857.14Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_ACIAC1.553e-5856.07Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_SYNS92.028e-5856.67Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_CAUCR2.028e-5857.28Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_VARPS2.649e-5857.48Adenosylhomocysteinase OS=Variovorax paradoxus (st... [more]
SAHH_RHIEC2.649e-5856.19Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_PROM42.649e-5857.14Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_POLSQ2.649e-5856.67Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC34105A04EF PostHarvP1 Citrus clementina cDNA clone C34105A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931427 ID=FC931427; Name=FC931427; organism=Citrus clementina; type=EST; length=640bp
AAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCC
TTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGC
CGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCT
CCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGT
GACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTG
GTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATC
TCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTC
AAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTC
CACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGT
TGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGT
GTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTTTATCAGATGCAAGA
AAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCA
AGAGCAAGTTTGATAACTTGTATGGATGCCGCACTCGCTC
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