FC931427

Overview
NameFC931427
Unique NameFC931427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:232..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.649e-58
Identity = 123/215 (57.21%), Postives = 143/215 (66.51%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL-TIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF  SQP KGA+ITGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQDH              +KGETL +YW  T +  D+G     G GP++I+DDGGDATLL+H G KAE       K P   S   +E +  L   I+  L  DP  Y +   +++GV+EETTTGV R  +M   GTLLF AINVNDSVTKSKFDNLYGCR
Sbjct:   35 MPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALVAAGTPVFAYKGETLTDYWDYTHRIFDFGAKGTDGEGPNMILDDGGDATLLMHLGQKAE-------KDPSVISKPTSEEETCLFAAIKAKLAQDPTWYTRKSAQIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR 242          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.459e-58
Identity = 118/210 (56.19%), Postives = 142/210 (67.62%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              +KGE+L +YW  T + L+W    GP++I+DDGGDATLL+  G +AE   +    L +P      E +++   IR  L A P  Y +++  + GV+EETTTGV R Y+MQ  G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   35 MPGLMAIREEYRAAQPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAADGIPVFAYKGESLDDYWEYTHRILEWPGDVGPNMILDDGGDATLLVTLGARAE---KDASLLANPTC---EEEEVLFAAIRKRLAAKPGWYSRIQAGIKGVTEETTTGVHRLYEMQAKGRLPFPAINVNDSVTKSKFDNLYGCR 238          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_GEOSL (Adenosylhomocysteinase OS=Geobacter sulfurreducens GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.459e-58
Identity = 118/213 (55.40%), Postives = 140/213 (65.73%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN---AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+  ++P +GA+I GSLHMTIQTA+LIETL ALGAEVRW SCNIFSTQDH              +KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G  AE+         DP+   N    E Q +   I+  L   P  Y K    + GV+EETTTGV R YQM E G L FPAINVNDSVTKSKFDN+YGCR
Sbjct:   38 MPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEK---------DPSVIANPTCEEEQYLFASIKKRLAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGCR 241          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.518e-58
Identity = 118/210 (56.19%), Postives = 142/210 (67.62%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L  P S    E +I+   I+  L A P  + K ++ + GV+EETTTGV R YQ+ + G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMSCRAEFGDAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE---AGEDVLSHPHS---EEEEILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDSVTKSKFDNKYGCK 232          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_POLNS (Adenosylhomocysteinase OS=Polynucleobacter necessarius (strain STIR1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.707e-58
Identity = 118/210 (56.19%), Postives = 139/210 (66.19%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGL+A R EF   QP +G +ITGSLHMTIQTAVLIETL ALGAEV+W SCNIFSTQDH               KGETL++YW  T +  +W  GG  ++I+DDGGDATLL+H G +AE   +    L  P S +     I+   I++ L  DP  Y    E++ GV+EETTTGV R YQM   G L FPAINVNDSVTKSKFDNLYGCR
Sbjct:   37 MPGLIAIRDEFAAQQPLRGTRITGSLHMTIQTAVLIETLEALGAEVQWASCNIFSTQDHAAAAIAANGTPVFAIKGETLEQYWDFTHRIFEWADGGYTNMILDDGGDATLLLHLGARAE---KDQACLNHPTSEEET---ILFAAIKNKLAQDPTWYSTRLEKVKGVTEETTTGVHRLYQMFARGDLKFPAINVNDSVTKSKFDNLYGCR 240          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.007e-57
Identity = 121/214 (56.54%), Postives = 143/214 (66.82%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   +    L +P S    E +I+   I+  L  D   Y +   +++GV+EETTTGV R  +M   GTL+F AINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLANPGS---EEERILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLMFRAINVNDSVTKSKFDNLYGCR 240          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.007e-57
Identity = 122/214 (57.01%), Postives = 142/214 (66.36%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   +    L  P S    E +I+   I+  L  D   Y +   +++GV+EETTTGV R  +M   GTLLF AINVNDSVTKSKFDNLYGCR
Sbjct:   33 MPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLAHPGS---EEERILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR 240          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.315e-57
Identity = 117/210 (55.71%), Postives = 141/210 (67.14%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L  P S    E +I+   I+  L A P  + K ++ + GV+EETTTGV R YQ+ + G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMSCRTEFGQAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE---AGEDVLSHPHS---EEEEILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDSVTKSKFDNKYGCK 232          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.315e-57
Identity = 117/210 (55.71%), Postives = 141/210 (67.14%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L  P S    E +I+   I+  L A P  + K ++ + GV+EETTTGV R YQ+ + G L FPAINVNDSVTKSKFDN YGC+
Sbjct:   29 MPGLMSCRTEFGQTKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE---AGEDVLSHPHS---EEEEILFAQIKKRLAASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDSVTKSKFDNKYGCK 232          
BLAST of FC931427 vs. ExPASy Swiss-Prot
Match: SAHH_METNO (Adenosylhomocysteinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ahcY PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.315e-57
Identity = 118/211 (55.92%), Postives = 139/211 (65.88%), Query Frame = 3
Query:    3 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRFYQMQENGTLLFPAINVNDSVTKSKFDNLYGCR 632
            MPGLMA R E+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  +W  GG P++I+DDGGDAT+ +H G++AE      G         + E +I   +I+  LK  P+ +   + E + GVSEETTTGV R Y +   G LLFPAINVNDSVTKSKFDNLYGCR
Sbjct:   29 MPGLMAVRREYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFEWHDGGMPNMILDDGGDATMFVHAGLRAER-----GDAVFLDKPGSEEEEIFFALIKRMLKEKPQGWFAGLAESIKGVSEETTTGVHRLYLLAREGKLLFPAINVNDSVTKSKFDNLYGCR 234          
The following BLAST results are available for this feature:
BLAST of FC931427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_METPP2.649e-5857.21Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_METCA3.459e-5856.19Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_GEOSL3.459e-5855.40Adenosylhomocysteinase OS=Geobacter sulfurreducens... [more]
SAHH_RHIE64.518e-5856.19Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_POLNS7.707e-5856.19Adenosylhomocysteinase OS=Polynucleobacter necessa... [more]
SAHH_DIAST1.007e-5756.54Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_ACISJ1.007e-5757.01Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_RHILW1.315e-5755.71Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_RHIL31.315e-5755.71Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_METNO1.315e-5755.92Adenosylhomocysteinase OS=Methylobacterium nodulan... [more]

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Properties
Property NameValue
Genbank descriptionC34105A04EF PostHarvP1 Citrus clementina cDNA clone C34105A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931427 ID=FC931427; Name=FC931427; organism=Citrus clementina; type=EST; length=640bp
AAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCC
TTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGC
CGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCT
CCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGT
GACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTG
GTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATC
TCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTC
AAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTC
CACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATGGGT
TGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTTGGT
GTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTTTATCAGATGCAAGA
AAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCA
AGAGCAAGTTTGATAACTTGTATGGATGCCGCACTCGCTC
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