FC931428

Overview
NameFC931428
Unique NameFC931428
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNV (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.341e-38
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 3
Query:  102 EDYKKAVEKCKRKL--RGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDD--KAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGLRDHGPXTLSFLT 635
            ++Y+K   +    L   G+  + + AP++LR+AWH++GTY     TGG  F TMR   E  HSANNGL +A   +E  K++FP ISY DL+ L G+  ++ +GGP IP+ PGR D   A+   +GRLPDA Q  DHLR +F  +MG +D++IVALSG H +GRCH  RSG    GP T S +T
Sbjct:  105 DEYQKVYNRIAETLDKEGY-DDGSLAPVLLRLAWHASGTYSKADGTGGSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAIQESGGPTIPWRPGRIDGYAAQVTPDGRLPDATQAQDHLRFIFN-RMGFNDQEIVALSGAHAMGRCHPNRSGF--DGPWTFSPVT 283          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.573e-37
Identity = 77/168 (45.83%), Postives = 103/168 (61.31%), Query Frame = 3
Query:  120 VEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKT----GGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDA--KQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            ++  +  +R  +   +C P+++R+ WH +GTYD   K     GG  G++R   E  H AN GL  A++L++P K+++P ISYADL+QLA    +E  GGP IP   GR D   P   P EG+LPDA      DHLR+VF  +MGL DK+IV LSG HTLGR   ERSG
Sbjct:   92 LKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVF-YRMGLDDKEIVVLSGAHTLGRSRPERSG 258          

HSP 2 Score: 34.2686 bits (77), Expect = 1.573e-37
Identity = 17/37 (45.95%), Postives = 20/37 (54.05%), Query Frame = 2
Query:  608 WTRHPLIFDNSYFTELLTGEKGWSSALPSDKALLDDP 718
            WT   L FDNSYF E+          LP+D AL +DP
Sbjct:  279 WTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDP 315          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR_ASPFU (Cytochrome c peroxidase, mitochondrial OS=Aspergillus fumigatus GN=ccp1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.427e-37
Identity = 86/193 (44.56%), Postives = 117/193 (60.62%), Query Frame = 3
Query:   33 GFASLFLISFSVEKMTKNYPTVSEDYKKAVEKCKRKLRGFIA--EKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDK--AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            G  +   ++ S    +K +    EDY+K  +   R+L       + +  P+++R+AWH++GTYD +T TGG  G TMR A E  H AN GL IA   LEP K QFP ISY+DL+ LAG   ++  GGP IP+ PGR DK  A    +GRLPDA +   H+R +F  +MG +D++IVAL G H LGR H +RSG
Sbjct:   70 GAGAYLYLNGSDSVTSKTFVPGKEDYQKVYDAIARRLADETDYDDGSYGPVLVRLAWHASGTYDKETGTGGSNGATMRFAPESDHGANAGLKIARDFLEPIKAQFPWISYSDLWTLAGACAIQELGGPTIPWRPGRQDKDVAACTPDGRLPDASKDQRHIRDIF-YRMGFNDQEIVALIGAHALGRAHPDRSG 261          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 5.880e-37
Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 3
Query:  120 VEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKT----GGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDD---KAEPPQEGRLPDA--KQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            ++  +  +R  +    C P+M+R+ WH +GTYD   +     GG  G++R  AE +H AN GL  A++L++P K+++P I+YADL+QLA    +E  GGP IP   GR D     + P EGRLPDA  +   DHLR+VF  +MGL DK+IVALSG HTLGR   +RSG
Sbjct:   91 LKSAREDIREILKTTYCHPIMVRLGWHDSGTYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVF-YRMGLDDKEIVALSGAHTLGRSRPDRSG 257          

HSP 2 Score: 32.3426 bits (72), Expect = 5.880e-37
Identity = 16/37 (43.24%), Postives = 20/37 (54.05%), Query Frame = 2
Query:  608 WTRHPLIFDNSYFTELLTGEKGWSSALPSDKALLDDP 718
            WT   L FDNSYF ++          LP+D AL +DP
Sbjct:  278 WTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDP 314          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR_YARLI (Cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=CCP1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.695e-37
Identity = 85/203 (41.87%), Postives = 114/203 (56.16%), Query Frame = 3
Query:   33 GFASLFLISFSVEKMTKNYPTVSEDYKKAVEKCKRKL--RGFIAEKNCAPLMLRIAWHSAGTYDVK-TKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAE--PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGLRDHGPXTLS 626
            G  + +  + S     + +     DY+K  +    KL       + +  P++LR+AWHS+GTY+    K G   GTMR   E +H+ANNGL  A   L+P  E+FP IS  DLY L G+  V+  GGP IP+  GR D+ E   P +G LPDA QG  H+R VF  Q G +D+++VAL G H LGRCHK+ SG    GP T S
Sbjct:   44 GAGAYYYYANSPAAKVETFNATKADYQKVYDAIADKLIEDDDYDDGSYGPVLLRLAWHSSGTYNKSDNKFGSSGGTMRFKPEASHAANNGLVNARNFLKPIHEKFPWISTGDLYTLGGVTAVQELGGPIIPWKRGRVDEPESASPPDGSLPDASQGATHVRNVFNRQ-GFNDQEMVALIGAHALGRCHKQNSGF--EGPWTFS 243          

HSP 2 Score: 29.261 bits (64), Expect = 7.695e-37
Identity = 17/55 (30.91%), Postives = 22/55 (40.00%), Query Frame = 2
Query:  599 EGPWTRHPLIFDNSYFTELLTGEKGWSS----------------ALPSDKALLDD 715
            EGPWT  P +F N ++  LL  +  W                   LP+D AL  D
Sbjct:  237 EGPWTFSPTMFTNDFYKLLLDDKWQWKKWDGNPQYEDVKTKSLMMLPTDMALATD 291          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR2_USTMA (Putative heme-binding peroxidase OS=Ustilago maydis GN=CCP2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.702e-36
Identity = 77/148 (52.03%), Postives = 98/148 (66.22%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            +  P+++R+AWH++GTY  +T TGG  G  MR  AE    AN GL  A   LEP KE+   I+YADL+ LAG+V +E  GGP I + PGR D A+    P  GRLPD  QG DHLR +F  +MG +D++IVALSG H LGRCH +RSG
Sbjct:   27 SAGPVLVRLAWHASGTYCARTDTGGSNGAGMRYEAEGGDPANAGLQHARVFLEPIKEKHSWITYADLWTLAGVVAIEAMGGPSIQWKPGRTDFADDSRLPPRGRLPDGAQGADHLRFIFN-RMGFNDQEIVALSGAHNLGRCHSDRSG 173          

HSP 2 Score: 26.5646 bits (57), Expect = 1.702e-36
Identity = 10/20 (50.00%), Postives = 11/20 (55.00%), Query Frame = 2
Query:  599 EGPWTRHPLIFDNSYFTELL 658
            EGPW   P  F N Y+  LL
Sbjct:  175 EGPWVNSPTRFSNQYYKLLL 194          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR2_MAGGR (Putative heme-binding peroxidase OS=Magnaporthe grisea GN=MGG_10368 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.392e-36
Identity = 78/148 (52.70%), Postives = 96/148 (64.86%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            +  P+++R+AWHSAGTYD  T TGG  G  MR  AE    AN GL  A + LEP K + P I+YADL  LAG+V V   GGP+IP+  GR D A+    P  GRLPDA QG  H+R +F  +MG  D++IVALSG H+LGRCH   SG
Sbjct:   28 SAGPVLVRLAWHSAGTYDKSTDTGGSNGAGMRYEAEGGDPANAGLQNARQFLEPVKARHPWITYADLRTLAGVVAVRAMGGPEIPWRAGRTDFADDSRVPPRGRLPDATQGAAHVRDIF-YRMGFDDREIVALSGAHSLGRCHPANSG 174          

HSP 2 Score: 25.7942 bits (55), Expect = 6.392e-36
Identity = 10/21 (47.62%), Postives = 12/21 (57.14%), Query Frame = 2
Query:  599 EGPWTRHPLIFDNSYFTELLT 661
            EG W  +P  F N YF  LL+
Sbjct:  176 EGKWVNNPTRFSNQYFRLLLS 196          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: CCPR_USTMA (Cytochrome c peroxidase, mitochondrial OS=Ustilago maydis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.631e-35
Identity = 79/163 (48.47%), Postives = 105/163 (64.42%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRD----DKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGLRDHGPXTLSFLTIPTS 647
            P+++R+AWH++GTYD  + TGG  G TMR A E  H AN GL  A   +E   ++FP I+Y+DL+ L G+  ++  GGP IP+ PGR     DK  P  +GRLPD  +G DHLR +F  +MG +D++IVALSG H LGRCH +RSG    GP T +    PTS
Sbjct:  137 PVLVRLAWHASGTYDKNSNTGGSNGATMRFAPESEHGANAGLGAARDFMEKIHQKFPWITYSDLWTLGGVAAIQELGGPKIPWRPGRKDATADKCTP--DGRLPDGDKGPDHLRYIF-YKMGFNDQEIVALSGAHALGRCHTDRSGF--DGPWTFA----PTS 290          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.170e-34
Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  105 DYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT----KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKA---EPPQEGRLP--DAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            D +  +   +  +R  +    C P+++R+ WH AGTYD       K GG  G++R   E  H+AN GL  A+ L+ P K ++  ++YAD++QLA    +E  GGP IP   GR D A   E P EGRLP  D     +HLR+VF  +MGLSDK+IVALSG HTLGR   ERSG
Sbjct:   49 DVEAELRAAREDVRQLLKSNPCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFGVELVHAANKGLLKALFLVIPIKSKYAGVTYADIFQLASATAIEEAGGPKIPMIYGRADVADGEECPPEGRLPAADPPSPAEHLREVF-YRMGLSDKEIVALSGAHTLGRARPERSG 220          

HSP 2 Score: 30.0314 bits (66), Expect = 1.170e-34
Identity = 15/36 (41.67%), Postives = 18/36 (50.00%), Query Frame = 2
Query:  608 WTRHPLIFDNSYFTELLTGEKGWSSALPSDKALLDD 715
            WT   L FDNSYF E+          LP+D  L +D
Sbjct:  241 WTSEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFED 276          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.524e-34
Identity = 76/164 (46.34%), Postives = 103/164 (62.80%), Query Frame = 3
Query:  132 KRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT----KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP---PQEGRLPDAKQGN--DHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSG 596
            +  ++  +   +C P+++R+ WH AGTYD       K GG  G++R   E  H+AN GL  A++L++P K++   ++YADL+QLA    +E  GGP IP   GR D A P   P EGRLP A   +  +HLR+VF  +MGLSDK+IVALSG HTLGR   ERSG
Sbjct:   47 REDVKQLLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVF-YRMGLSDKEIVALSGAHTLGRSRPERSG 209          

HSP 2 Score: 28.8758 bits (63), Expect = 1.524e-34
Identity = 14/36 (38.89%), Postives = 18/36 (50.00%), Query Frame = 2
Query:  608 WTRHPLIFDNSYFTELLTGEKGWSSALPSDKALLDD 715
            WT   L FDNSYF ++          LP+D  L +D
Sbjct:  230 WTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFED 265          
The following BLAST results are available for this feature:
BLAST of FC931428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CCPR_CRYNV8.341e-3846.45Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
APX7_ORYSJ1.573e-3745.83Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
CCPR_ASPFU2.427e-3744.56Cytochrome c peroxidase, mitochondrial OS=Aspergil... [more]
APX8_ORYSJ5.880e-3745.83Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
CCPR_YARLI7.695e-3741.87Cytochrome c peroxidase, mitochondrial OS=Yarrowia... [more]
CCPR2_USTMA1.702e-3652.03Putative heme-binding peroxidase OS=Ustilago maydi... [more]
CCPR2_MAGGR6.392e-3652.70Putative heme-binding peroxidase OS=Magnaporthe gr... [more]
CCPR_USTMA8.631e-3548.47Cytochrome c peroxidase, mitochondrial OS=Ustilago... [more]
APX5_ORYSJ1.170e-3444.51Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APX6_ORYSJ1.524e-3446.34Probable L-ascorbate peroxidase 6, chloroplastic O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34105A05EF PostHarvP1 Citrus clementina cDNA clone C34105A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931428 ID=FC931428; Name=FC931428; organism=Citrus clementina; type=EST; length=718bp
GGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTCTTT
CTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAG
CGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCT
TCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCAC
TCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAAC
CATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATA
TTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCC
TACGCTGACCTTTATCAGCTTGCTGGTCTTGTTGGCGTTGAGGTTACCGG
TGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGCCAC
CTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGG
CAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCT
CTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTGA
GGGACCATGGACCCGNCACCCTCTCATTTTTGACAATTCCTACTTCACGG
AGCTCTTGACTGGTGAGAAAGGATGGTCTTCTGCATTGCCATCCGACAAG
GCCCTTCTGGATGACCCT
back to top