FC931428

Overview
NameFC931428
Unique NameFC931428
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ACIBT (Catalase-peroxidase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=katG PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ACIB5 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB0057) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_PSEMY (Catalase-peroxidase OS=Pseudomonas mendocina (strain ymp) GN=katG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 61/180 (33.89%), Postives = 83/180 (46.11%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQEGRL--------PDAKQGND--HLRQVFGA-------------------------------QMGLSDKDIVAL-SGGHTLGRCH 581
            P  +R+AWHSAGTY     + GG  G  R A   +   N  +D + RLL P K+++  +IS+ADLY LAG V +E  G     F  GR+D  EP Q+            D K+ ND   L   FGA                               +M ++D++IVAL +GGHT G+ H
Sbjct:   84 PQFIRMAWHSAGTYRTTDGRGGGGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQSISWADLYILAGNVALESMGFRTFGFGAGREDVWEPDQDVNWGAEVAWLGVDPKRVNDERELTAPFGATHMGLIYVNPEGPNASGDYLAAAKDIRATFYRMAMNDEEIVALIAGGHTFGKAH 263          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_JANSC (Catalase-peroxidase OS=Jannaschia sp. (strain CCS1) GN=katG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 63/183 (34.43%), Postives = 81/183 (44.26%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------EGR----------------LPDAKQGN-DHLRQVFG-----AQMGLSDKDIVAL-SGGHTLGRCH 581
            PLM+R+AWHSAGTY      GG   GT R A   +   N  LD A R+L P KE++  ++S+ADL  L G V +E  G     F  GR D  EP +                      EGR                 P    GN D L   F      A+M ++D++ VAL +GGHT G+ H
Sbjct:   93 PLMIRLAWHSAGTYRTYDGRGGAGTGTQRFAPLNSWPDNGNLDKARRILWPIKEKYGKSLSWADLLILVGNVALEDMGFETFGFAGGRADVWEPEEDIYWGPETEWLATSDMENTRYGEGRDLHNPLAAVQMGLIYVNPQGPDGNPDPLASAFDIRDTFARMAMNDEETVALVAGGHTFGKAH 275          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_RHOPS (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB5) GN=katG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  177 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   91 LMIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERQLHDALGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_FRASN (Catalase-peroxidase OS=Frankia sp. (strain EAN1pec) GN=katG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 62/178 (34.83%), Postives = 81/178 (45.51%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 581
            P M+R+AWHSAGTY +   + GG  G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG V +E  G     F  GR+D  EP       P+   L D +  G+  L    GA QMGL                               D++ VAL +GGHT G+ H
Sbjct:  101 PFMIRMAWHSAGTYRISDGRGGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLMILAGNVALESMGFTTFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGTPDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTH 278          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_STRRE (Catalase-peroxidase OS=Streptomyces reticuli GN=katG PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 66/190 (34.74%), Postives = 85/190 (44.74%), Query Frame = 3
Query:  165 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCHKERSGLRDH 608
            N  PLM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++  +IS+ADL  L G V +E  G     F  GR D  E        P+   L D +  G+  L    GA QMGL                              +D++ VAL +GGHT G+ H   +G  DH
Sbjct:   98 NYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQSISWADLLILTGNVALETMGFKTFGFGGGRADVWEAEEDVYWGPETTWLDDRRYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPIAAARDIRETFRRMAMNDEETVALIAGGHTFGKTH--GAGPADH 285          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_RHOPB (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB18) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  177 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY LAG V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   89 LFIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGQKISWADLYVLAGNVALESMGFQTFGFAGGRADTWEPEELFWGPEGTWLGDERYSGERQLADPLGAVQMGLIYVNPEGPNGNPDPLGSAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 264          
BLAST of FC931428 vs. ExPASy Swiss-Prot
Match: KATG_RHOP2 (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain HaA2) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  177 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGLVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   91 LMVRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERELSDPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 266          
The following BLAST results are available for this feature:
BLAST of FC931428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
KATG_ACIBT9.286e-1332.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB59.286e-1332.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB39.286e-1332.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_PSEMY1.213e-1233.89Catalase-peroxidase OS=Pseudomonas mendocina (stra... [more]
KATG_JANSC1.213e-1234.43Catalase-peroxidase OS=Jannaschia sp. (strain CCS1... [more]
KATG_RHOPS3.529e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_FRASN3.529e-1234.83Catalase-peroxidase OS=Frankia sp. (strain EAN1pec... [more]
KATG_STRRE4.609e-1234.74Catalase-peroxidase OS=Streptomyces reticuli GN=ka... [more]
KATG_RHOPB4.609e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_RHOP24.609e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]

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Properties
Property NameValue
Genbank descriptionC34105A05EF PostHarvP1 Citrus clementina cDNA clone C34105A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931428 ID=FC931428; Name=FC931428; organism=Citrus clementina; type=EST; length=718bp
GGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTCTTT
CTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAG
CGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCT
TCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCAC
TCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAAC
CATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATA
TTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCC
TACGCTGACCTTTATCAGCTTGCTGGTCTTGTTGGCGTTGAGGTTACCGG
TGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGCCAC
CTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGG
CAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCT
CTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTGA
GGGACCATGGACCCGNCACCCTCTCATTTTTGACAATTCCTACTTCACGG
AGCTCTTGACTGGTGAGAAAGGATGGTCTTCTGCATTGCCATCCGACAAG
GCCCTTCTGGATGACCCT
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