FC931429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.652e-70 Identity = 126/234 (53.85%), Postives = 160/234 (68.38%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLGG+TK QDL NAMG M+TAVLFLG+Q +SVQP+V+VERTVFYRE+AAGMY+ +P+A AQV IEIPY+LVQ++VYG IVYAMIGFEWTA KFFWY+ MAVA+TPNHHIA++VS+ FYG+WN+FSGF+ YYW P+AWTLYGL+ASQFGD+ + D+ +VKQF+++++ ++ IK FNFQKR Sbjct: 1190 DLGGKTKTRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITEPMADSNMSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.939e-69 Identity = 129/234 (55.13%), Postives = 153/234 (65.38%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLG + ++QDL NAMG M+ AVLFLGVQ SSVQP+V++ERTVFYRE+AAGMY+ IP+A QV IEIPYI VQSV YG IVYAMIGFEW KFFWY+ M VA+TPN ++A+IV+ FYG+WN+FSGF+ YYWANP+AWTLYGLVASQFGD+ K D ETV+QFL+ YF FKHD IK FNFQ+R Sbjct: 1202 DLGTKVSKSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQTKLSD-NETVEQFLRRYFGFKHDFLGVVAAVLTAYVFMFAFTFAFAIKAFNFQRR 1434
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.874e-68 Identity = 128/234 (54.70%), Postives = 154/234 (65.81%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLGG+ ++QDLFNAMG M+ AVLF+GV C+SVQP+V+VERTVFYRE+AAGMY+ P+A QV+IEIPY LVQ+ VYG IVYAMIGFEWTAAKFFWY+ MAV LTPN+HIA+IVS+ FY +WN+FSGFV Y WA P+AWTLYGLV SQFGD+ + M+ G VK F+++YF FKH I FNFQKR Sbjct: 1225 DLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDI-ETPMEDGTPVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.874e-68 Identity = 128/234 (54.70%), Postives = 154/234 (65.81%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLGG+ ++QDLFNAMG M+ AVLF+GV C+SVQP+V+VERTVFYRE+AAGMY+ P+A QV+IEIPY LVQ+ VYG IVYAMIGFEWTAAKFFWY+ MAV LTPN+HIA+IVS+ FY +WN+FSGFV Y WA P+AWTLYGLV SQFGD+ + M+ G VK F+++YF FKH I FNFQKR Sbjct: 1225 DLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDI-ETPMEDGTPVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.874e-68 Identity = 129/234 (55.13%), Postives = 151/234 (64.53%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 D+G + RNQDL NAMG M+ AVLFLGVQ SSVQP+VSVERTVFYREKAAGMY+ IP+A AQV+IEIPYI VQ+ VYG IVY+MIGFEWT AKFFW M VA+TPN ++A+IV+ FY +WN+FSGF+ YYW PIAWTLYGLVASQFGD+ D D +TV+QFL+ F FKHD IK FNFQ+R Sbjct: 1203 DIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQDPLTDQNQTVEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.210e-66 Identity = 125/234 (53.42%), Postives = 153/234 (65.38%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLGG+T ++QDLFNAMG M++AVLF+GV SVQP+VSVERTVFYRE+AAGMY+ P+A QV IE PY LVQS++YG IVY+MIGF+WTAAKFFWY+ MAV LTP++H+A+IVS+ FYG+WN+FSGF+ Y W P+AWTLYGLVASQFGD+ MD G VK F+++YFDFKH I NFQKR Sbjct: 1232 DLGGKTGKSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDI-MTPMDDGTPVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.554e-63 Identity = 117/234 (50.00%), Postives = 148/234 (63.25%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLG + + DL NAMG M+ AVLF+G+Q +VQPIV VERTVFYREKAAGMY+ +P+A AQV+IE+P+ILVQ+++YG +VY+MIGF+WTAAKF WY+ MAVA+TPN IAAIV+ FY +WN+F+GF+ YYWA P+AWTLYGLV SQFG+ D D ETVK FL+ + F+HD IK NFQ+R Sbjct: 1208 DLGKKRSTSLDLINAMGSMYAAVLFIGIQNAQTVQPIVDVERTVFYREKAAGMYSALPYAYAQVLIEVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTMSDVDETVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.690e-63 Identity = 115/234 (49.15%), Postives = 153/234 (65.38%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 +LG + + DLFN++G M+ AVLF+G+Q +VQPIV VERTVFYREKAAGMY+ +P+A AQV+IEIP+I +Q+VVYG IVY++IGF+WT KFFWY+ MAVA+TPN IAAIVST FY +WN+F+GF+ Y WA P+AWTLYGLVASQ+GD+ + ++ GE V+ +++ YF F+HD IK+FNFQ+R Sbjct: 1211 NLGKKINKRLDLFNSLGSMYAAVLFIGIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.291e-62 Identity = 117/234 (50.00%), Postives = 145/234 (61.97%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 +LG RTK+ QDLFNAMG M+ AVL++GVQ SVQP+V VERTVFYRE+AAGMY+ P+A QV IE+PYI+VQ+++YG +VY+MIGFEWT AKF WY+ MAV LTPN IAAI+S+ FY +WN+FSG++ Y W P+AWTLYGLVASQFGD+ TV QF+ DYF F H+ I FNFQ+R Sbjct: 1217 NLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR 1450
BLAST of FC931429 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.073e-61 Identity = 118/234 (50.43%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 DLGGRTKRNQDLFNAMGPMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIXXXXXXXXXXXXXXXMAVALTPNHHIAAIVSTLFYGLWNVFSGFVXXXXXXXXXXXXYYWANPIAWTLYGLVASQFGDMDDKKMDTGETVKQFLKDYFDFKHDXXXXXXXXXXXXXXXXXXXXXXXIKMFNFQKR 703 DLGG+ ++QDLFNAMG M+ AVLF+GV SVQP+VSVERTVFYRE+AAGMY+ +P+A QV IE PY LVQSV+Y IVY+MIGF+WT AKFFWY+ MAV LTP++H+A+IVS+ FY +WN+F+GFV Y W P+AWTLYGL+ SQ+GD+ MD G V F+++YFDFKH I NFQKR Sbjct: 1236 DLGGKMGQSQDLFNAMGSMYAAVLFIGVLNGQSVQPVVSVERTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGLTPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYGDI-VTPMDDGIPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468 The following BLAST results are available for this feature:
BLAST of FC931429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931429 ID=FC931429; Name=FC931429; organism=Citrus clementina; type=EST; length=713bpback to top |