FC931430

Overview
NameFC931430
Unique NameFC931430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15324 contig Ccv1_Contig15324:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931430 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 46/153 (30.07%), Postives = 79/153 (51.63%), Query Frame = 3
Query:  225 PIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKEKLLKNVW 683
            PIINL KL   N  E  + +  +  ACE WGFF++++HGI   +++ +EK+ K  +   +E++ K       V   G   V +E   LDW + F L   P  + N    P    ++ E +  +++ + KL + LL  +  +LGL++  LK ++
Sbjct:    5 PIINLEKL---NGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFK-----ELVASKGLEAVQAEVTDLDWESTFFLRHLP--VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIF 147          
BLAST of FC931430 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 44/153 (28.76%), Postives = 79/153 (51.63%), Query Frame = 3
Query:  225 PIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKEKLLKNVW 683
            P++++  +   N +E    +  +  ACE WGFF++++HGI   LL+ +EK+ KD +   +E++ K       V   G   V SE   LDW + F L   P    N    P    ++ +T++ ++ ++ KL + LL  +  +LGL++  LK  +
Sbjct:    5 PVVDMDLI---NGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFK-----EMVAAKGLEAVQSEIHYLDWESTFFLRHLPS--SNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAF 147          
BLAST of FC931430 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 45/153 (29.41%), Postives = 80/153 (52.29%), Query Frame = 3
Query:  225 PIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKEKLLKNVW 683
            PII+L K+   N  E    +  +  ACE WGFF++++HGI   +++ +EK+ K  +   +E++ K  +    ++G     V +E   +DW + F L   P  I N    P    E+ E +  +++ + KL + LL  +  +LGL++  LKN +
Sbjct:    5 PIISLDKV---NGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLP--ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAF 147          
The following BLAST results are available for this feature:
BLAST of FC931430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
ACCO_TOBAC5.136e-1130.071-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO2_MALDO5.136e-1128.761-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_PETHY8.761e-1129.411-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionC34105A07EF PostHarvP1 Citrus clementina cDNA clone C34105A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931430 ID=FC931430; Name=FC931430; organism=Citrus clementina; type=EST; length=719bp
GAAGTAAAGCTTCATATATTTTTCTTTAGTTGCAGTTAGATTATCGCTTC
AAAAACTCTGTTTCCATGGCTCCAGTACCAACTTTTCCCGTCAAAGTTGG
TCAAATAGATGATGTTCAAGAGCTGAGAAAAGTCGAACCTAGCACAATTC
CTGAAAGATTTGTTAGAGACTTGACTGAAAGGCCATCGTCACTGGCTACA
GCTCTTTCTCCACCTGGTGGCATTCCCATCATCAACCTCTCAAAACTCAT
GAAGGGCAACCACGATGAATTTCACAATGAAATTTTAAACCTCGCAACTG
CCTGCGAAGAGTGGGGATTCTTTCAGGTGATTGACCATGGGATTGAACTG
AACTTACTCGAGAACATAGAGAAGGTGGCCAAAGATTTTTTCATGCTACC
TTTAGAAGAGAAAAAGAAGTACCCCATGCTACCAGGGACAGTTCAAGGAT
ATGGGCAAGCTTTTGTGTTCTCGGAGAACCAAAAACTTGATTGGTGCAAC
ATGTTTGCCCTTGGTGTCGAGCCTCACTTTATCAGGAACCCAAAACTCTG
GCCAGCAAAGCCAGCTGAGTTCAGTGAAACTCTAGAGACTTACTCAAGAG
ATGTGAGAAAACTTTGCCAGTGTCTGCTCAAGTACGTAGCAATAAGCCTT
GGCTTGAAAGAGAAACTTTTGAAGAATGTTTGGGGTTGCTGTGCAGGCTG
TGAGGATGACTACTACCAC
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