FC931441

Overview
NameFC931441
Unique NameFC931441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13004 contig Ccv1_Contig13004:43..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_HAEIN (Glutathione reductase OS=Haemophilus influenzae GN=gor PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 57/173 (32.95%), Postives = 90/173 (52.02%), Query Frame = 1
Query:  220 KAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFA-SHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 735
            +AA  G K   IE +  LGGTC+NVGC+P K + + +H+  EA++++A  +G      + D   ++  +   +S +      +  KN +  + G+G+F+    + V   +G    V   +I+IATG      P I   E  I  S G  AL E+PK+  VIGAGYI +E+  V
Sbjct:   22 RAASYGKKCAIIEAKH-LGGTCVNVGCVPKKVMFYGAHI-AEAINNYAPDYGFDVEVKKFDFSKLIESRQAYISRIHTSYNNVLAKNNIDVINGFGKFVDAHTIEVTLADGTKEQVTADHILIATGGR-PYRPNIKGQEYGI-DSDGFFALTELPKRAAVIGAGYIAVELSGV 190          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_ACICA (Mercuric reductase OS=Acinetobacter calcoaceticus GN=merA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G   + IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T V G   F     + V   +GG  VV     ++ATG+   V  +PG  + E    +ST AL  + +P++L VIG+  + LE+   +A
Sbjct:  113 AALKAVEQGAHVSLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVEELRHAKYEGILDGNPAITVVHGEARFKDEQSLVVRLNDGGERVVAFDRCLVATGASPAVPPIPG--LKESPYWTSTEALVSDTLPERLAVIGSSVVALELAQAFA 290          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: DLDH_MYCPN (Dihydrolipoyl dehydrogenase OS=Mycoplasma pneumoniae GN=pdhD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEKR--IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA  A +  LKT  +EK    GG CLNVGCIP+K LL  + +     H+   +G+  +  V ++   ++ QK K VS L  G++ +    K   V G  + + P+ V V     G T    K+I++ATGS  +  +LPG     +   ++ ST AL+L  VP+KLVV+G G IG+E   ++A
Sbjct:   17 AAEYAGKHKLKTLVVEKE-YFGGVCLNVGCIPTKTLLKRAKIVDYLRHA-QDYGISINGQVALNWNQLLEQKGKVVSKLVGGVKAIIASAKAETVMGEAKVLDPNTVEV----AGKTYTT-KSIVVATGSRPRYLTLPGFAEARQNGFVIDSTQALSLEGVPRKLVVVGGGVIGIEFAFLYA 191          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_PSEFL (Mercuric reductase OS=Pseudomonas fluorescens GN=merA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            AA+KA + G   T IE RG +GGTC+N+GC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T + G   F     + V   EGG   V     ++ATG+   V  +PG  + E    +ST AL  + +P +L VIG+  + LE+   +A
Sbjct:  100 AALKAVEQGATVTLIE-RGTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQSLVVRLNEGGEREVTFDRCLVATGASPAVPPIPG--LKESPYWTSTEALVSDTIPARLAVIGSSVVALELAQAFA 277          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_NEUCR (Glutathione reductase OS=Neurospora crassa GN=glr-1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 56/176 (31.82%), Postives = 91/176 (51.70%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF-SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSV 735
            A   A + G+K+  +E +  LGGTC+NVGC+P K   +++ +  E +H    +G     +   D P    ++D  V+ L    E     +KV YV G+ + +SP+ V V   +G  +VV  K I+IA G +    P I   E    +S G   ++ +PKK+ ++GAGYI +E   +
Sbjct:   23 ARAAAGKYGIKSMVVEGK-RLGGTCVNVGCVPKKVTFYAA-LVAETIHQAKDYGFSVEQTAPFDWPTFKQKRDAYVARLNGIYERNLANDKVEYVHGWAKLLSPNSVEVTLDDGTKSVVNAKKILIAVGGNPTIPPHIPGSEYG-TNSDGFFDIDTLPKKVALVGAGYIAVEFAGM 195          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_SCHPO (Glutathione reductase OS=Schizosaccharomyces pombe GN=pgr1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV-EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEG-GNTVVKGKNIIIATGSD---VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            +A +AA+ G K   IE  G LGGTC+N GC+P K + + + +  + M +   +G   S +   D   +  ++D  +  L    E    K+ V Y+ G+  F+SP+EV+VD  +G G  V   K I+IA G        +PG        + S G   L   PK++ ++GAGYI +E+  V+A
Sbjct:   22 SARRAAKHGAKVALIEASGRLGGTCVNYGCVPKKIMWNIADLVAK-MKTAKQNGFPNSQLGSFDWGMIKRKRDAYIGRLNGIYERNVNKDGVAYISGHASFVSPTEVAVDMNDGSGTQVFSAKYILIAVGGHPIWPSHIPGAEYG----IDSDGFFELESQPKRVAIVGAGYIAVELAGVFA 198          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: TRXR1_HUMAN (Thioredoxin reductase 1, cytoplasmic OS=Homo sapiens GN=TXNRD1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 58/180 (32.22%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLE 723
            AA +AAQ G K   ++         R  LGGTC+NVGCIP K L+H + +  +A+    ++G K   +V+ D   M+      + +L  G     ++ KV Y   YG+FI P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +V+GA Y+ LE
Sbjct:  177 AAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALE 354          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: TRXR1_PONAB (Thioredoxin reductase 1, cytoplasmic OS=Pongo abelii GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLE 723
            AA +AAQ G K   ++         R  LGGTC+NVGCIP K L+H + +  +A+    ++G K   +V+ D   M+      + +L  G     ++ KV Y   YG+FI P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +++GA Y+ LE
Sbjct:   27 AAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLIVGASYVALE 204          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: MERA_THIFE (Mercuric reductase OS=Thiobacillus ferrooxidans GN=merA PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 55/180 (30.56%), Postives = 93/180 (51.67%), Query Frame = 1
Query:  214 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWA 741
            A+KA + G + T IE R  +GGTC+N+GC+PSK ++ ++H+ H    S    G++  +  +   A++ Q+   V  L     EG+   N  +T ++G   F     V V   +GG  VV     ++ATG+   V  +PG  + +    +ST  L    +P++L VIG+  + LE+   +A
Sbjct:  100 ALKAVERGARVTLIE-RSTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIQAVAPTIQRTALLVQQQARVDELRHAKYEGILDGNPAITVLRGEARFKDSRSVVVHLNDGGERVVMFDRCLVATGASPAVPPIPG--LKDTPYWTSTEGLVSESIPERLAVIGSSVVALELAQAFA 276          
BLAST of FC931441 vs. ExPASy Swiss-Prot
Match: GSHR_YEAST (Glutathione reductase OS=Saccharomyces cerevisiae GN=GLR1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17
Identity = 57/184 (30.98%), Postives = 91/184 (49.46%), Query Frame = 1
Query:  211 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS-----FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDV---KSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVW 738
            +A +AA  G KT  +E + ALGGTC+NVGC+P K + ++S +     H+     + +  +    +  + P    ++D  V  L    +   +K KV  V G+  F     V V   +    V    +I++ATG      +++PG  +       S G   L E PKK+VV+GAGYIG+E+  V+
Sbjct:   38 SARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFELG----TDSDGFFRLEEQPKKVVVVGAGYIGIELAGVF 216          
The following BLAST results are available for this feature:
BLAST of FC931441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
GSHR_HAEIN5.453e-1932.95Glutathione reductase OS=Haemophilus influenzae GN... [more]
MERA_ACICA7.121e-1933.15Mercuric reductase OS=Acinetobacter calcoaceticus ... [more]
DLDH_MYCPN7.121e-1935.71Dihydrolipoyl dehydrogenase OS=Mycoplasma pneumoni... [more]
MERA_PSEFL1.586e-1832.60Mercuric reductase OS=Pseudomonas fluorescens GN=m... [more]
GSHR_NEUCR2.072e-1831.82Glutathione reductase OS=Neurospora crassa GN=glr-... [more]
GSHR_SCHPO2.706e-1832.42Glutathione reductase OS=Schizosaccharomyces pombe... [more]
TRXR1_HUMAN6.028e-1832.22Thioredoxin reductase 1, cytoplasmic OS=Homo sapie... [more]
TRXR1_PONAB7.873e-1831.67Thioredoxin reductase 1, cytoplasmic OS=Pongo abel... [more]
MERA_THIFE1.028e-1730.56Mercuric reductase OS=Thiobacillus ferrooxidans GN... [more]
GSHR_YEAST1.343e-1730.98Glutathione reductase OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionC34105B06EF PostHarvP1 Citrus clementina cDNA clone C34105B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931441 ID=FC931441; Name=FC931441; organism=Citrus clementina; type=EST; length=741bp
GAATTCAATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGC
AAGTCTTGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACT
CGTCGAATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTC
GCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGG
TGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGT
GCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGC
ATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCAT
GCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATT
TGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGA
GGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATA
TGGCGAGTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTG
GAAACACTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGAC
GTTAAGTCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATC
CACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTG
GGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCC
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