FC931458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CBS_DICDI (Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.301e-24 Identity = 60/116 (51.72%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 251 VIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLT 598 +I ++ + IG TPLV +N++ + AK E SVKDRIG+ MI DAEE G I+ G++ LIEPTSGNTGIGLA AA KGY++IIT+P MS E+ VL A GAE++ T Sbjct: 31 LIMDNILDNIGGTPLVRVNKVSSDLECELVAKCEFFNAGGSVKDRIGHRMIVDAEESGRIKKGDT-LIEPTSGNTGIGLALTAAIKGYKMIITLPEKMSQEKVDVLKALGAEIIRT 145
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.311e-24 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKRAVQKA 637 I +D + IG TPLV LN I +G I AK+E P SVK RIG +MI DAE+KG + + IE TSGNTGI LA++AAA+ Y L + MP SMS+ERR +L + GA L+LT+ GMK A+ KA Sbjct: 4 IYEDNSFTIGNTPLVRLNNIGNG---NILAKIESRNPSFSVKCRIGANMIWDAEKKGRLNKNIEI-IEATSGNTGIALAYVAAARNYSLTLIMPDSMSIERRKLLKSLGAHLILTNGKHGMKGAISKA 127
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CYSM_SALTY (Cysteine synthase B OS=Salmonella typhimurium GN=cysM PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24 Identity = 62/118 (52.54%), Postives = 79/118 (66.95%), Query Frame = 2 Query: 272 ELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKRA 625 + IG TPLV L R+ + I KLE P SVKDR SMI +AE++G I+PG+ VLIE TSGNTGI LA +AA KGYR+ + MP +MS ERR + A+GAEL+L +GM+ A Sbjct: 6 QTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CBS_RABIT (Cystathionine beta-synthase OS=Oryctolagus cuniculus GN=CBS PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 9.604e-24 Identity = 63/117 (53.85%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLT 598 I D+ + IG TP+V +N+I G + AK E SVKDRI MI DAE G +RPG+++ IEPTSGNTGIGLA AA KGYR II MP MSLE+ VL A GAE+V T Sbjct: 76 ILPDILQKIGDTPMVRINKIGKNFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLRPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSLEKVDVLRALGAEIVRT 191
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CYSM_ECOLI (Cysteine synthase B OS=Escherichia coli (strain K12) GN=cysM PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.254e-23 Identity = 61/118 (51.69%), Postives = 79/118 (66.95%), Query Frame = 2 Query: 272 ELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKRA 625 + IG TPLV L R+ + + KLE P SVKDR SMI +AE++G I+PG+ VLIE TSGNTGI LA +AA KGYR+ + MP +MS ERR + A+GAEL+L +GM+ A Sbjct: 6 QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CBS_RAT (Cystathionine beta-synthase OS=Rattus norvegicus GN=Cbs PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.638e-23 Identity = 62/117 (52.99%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLT 598 I D+ IG TP+V +NRI G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA KGYR II MP MS+E+ VL A GAE+V T Sbjct: 73 ILPDILRKIGNTPMVRINRISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRT 188
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.766e-23 Identity = 60/129 (46.51%), Postives = 83/129 (64.34%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKRAVQKAE 640 I D + IG TPLV L G + K+E P SVK RIG +M+ AE+ G + G+ + ++ TSGNTGI LA++AAA+GY++ +TMP +MSLER+ +L G LVLT+ A+GMK A+ KAE Sbjct: 3 IYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAE 128
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CBS_MOUSE (Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 6.225e-23 Identity = 61/117 (52.14%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLT 598 I D+ IG TP+V +N+I G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA KGYR II MP MS+E+ VL A GAE+V T Sbjct: 73 ILPDILRKIGNTPMVRINKISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGNLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRT 188
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.089e-22 Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLT 598 I D+ + IG TP+V +N+I G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA +GYR II MP MS E+ VL A GAE+V T Sbjct: 76 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRT 191
BLAST of FC931458 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.035e-22 Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 254 IAKDVTELIGKTPLVYLNRIVD--GCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLT 598 I D+ + IG TP++ +N+I G + AK E SVKDRI MI DAE G ++PG+++ IEPTSGNTGIGLA AA +GYR II MP MS E+ VL A GAE+V T Sbjct: 76 ILPDILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRT 191 The following BLAST results are available for this feature:
BLAST of FC931458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931458 ID=FC931458; Name=FC931458; organism=Citrus clementina; type=EST; length=640bpback to top |