FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.513e-67 Identity = 126/189 (66.67%), Postives = 160/189 (84.66%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSN-IRSTIDRYKKACSDNSNSGTVTEINA-QYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQE 661 MGRGKIEIKRIEN T+RQVTFCKRRNGLLKKAYEL++LCDAE+ALIVFSSRGRLYE+SN N RSTI+RYKKA + S S V ++N+ QY+QQE+AK+R QIQ LQN+NRHL+G+S+ ++T KELK LENRLE+GI+RIRSKKHE+L +EIE++QKRE +L+NE++ LR K+AE ER + + ++ Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQAAED 189
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 3.513e-67 Identity = 134/187 (71.66%), Postives = 166/187 (88.77%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSN-IRSTIDRYKKACSDNSNSGT-VTEINAQ-YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVT 652 MGRG+IEIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN+N +++TIDRYKKA + S SG + E+NAQ YYQQESAKLR QIQMLQN+N+HL+GD++S+L++KELKQLE+RLE+GI++IR++K+E+L +EI ++ KREIEL+N+++ LR KIAE E QQ VT Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEE--QQLQQVT 185
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.588e-67 Identity = 125/182 (68.68%), Postives = 161/182 (88.46%), Query Frame = 2 Query: 107 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER-FQQANMV 649 RGKIEIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFSSRGRLYEYSN++++ TI+RYKKA SD SN+ TV EINAQ+YQQE+AKL+QQI LQNSNR L+GD+++++ +ELKQLE RL++G+ +IR++K+E+L AEIE++Q+RE EL+N+++ L+ K+AE ER Q NM+ Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMM 226
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.138e-41 Identity = 87/191 (45.55%), Postives = 130/191 (68.06%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKI------AEMERFQQANMVTG 655 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ ++ I T++RY+ C + +S +Y E +KL+ + + LQ + RHL+G+ L L+VKEL+QLE +LE +++ R +K ++++ ++E L+++E +L + L+ K+ + QQA+ G Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWY-HEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQG 190
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.486e-41 Identity = 89/170 (52.35%), Postives = 123/170 (72.35%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIK 610 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ + I STI+RY + C + S S E Q + QE KL+ + + L +NR+L+G+ L + VKEL+ LE +LE +T R +K ++++ E+E L+K+E +L + + L+IK Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNR-CYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIK 169
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.311e-41 Identity = 82/173 (47.40%), Postives = 127/173 (73.41%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKAC--SDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKI 613 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ ++ I T+++Y C + SNS + +Y QE ++L+ +++ LQ S RH++G+ L L++KEL+QLE +LE +++ R +K ++++ +++ L+++E +L + L+ K+ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWY-QEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 9.633e-41 Identity = 91/189 (48.15%), Postives = 128/189 (67.72%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKRE--IELENESVCLRIKIAEMERFQQANMVTGQE 661 MGRGKI I+RI+N+T+RQVTF KRRNGLLKKA ELS+LCDAEV L+VFSS GRLYE+S++N+++ IDRY A + +EI + +Q+E+A LRQQ+ LQ S++ LMG+ LS L V++L+ LENRLE + IR +K +L +EIE L + I EN + + + ++ + N + E Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLGGNATSEI--KIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKLELYNKLQACE 187
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.258e-40 Identity = 87/174 (50.00%), Postives = 130/174 (74.71%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSN-IRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAE 619 MGRGK+E+KRIEN +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E+S+S+ + T++RY ++C+ NS E Y QE KL+ +++ LQ + R+++G+ L L++KEL+QLEN++E + +IRS+K++ LL ++ L+ +E +L++ + LR K+ E Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY-RSCNYNSQDAAAPENEINY--QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.258e-40 Identity = 87/174 (50.00%), Postives = 130/174 (74.71%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSN-IRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAE 619 MGRGK+E+KRIEN +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E+S+S+ + T++RY ++C+ NS E Y QE KL+ +++ LQ + R+++G+ L L++KEL+QLEN++E + +IRS+K++ LL ++ L+ +E +L++ + LR K+ E Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY-RSCNYNSQDAAAPENEINY--QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.643e-40 Identity = 86/172 (50.00%), Postives = 124/172 (72.09%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIA 616 MGRGKI I+RI+N+T+RQVTF KRRNG+ KKA EL++LCDAEV L++FSS GRLYEYS+++++S IDRY K+ D + +++Q+E+A LRQQ+ LQ ++R LMG+ LS L VKEL+ LEN+LE + +R+KK +L+ EI L ++ + E++ L KI+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKS-KDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKIS 171 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |