FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36 Identity = 84/178 (47.19%), Postives = 124/178 (69.66%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKK----ACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAE 619 MGRG++E+KRIE NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S+S++ T++RY+K A N ++ EI++ QQE KL+ + + LQ S R+L+G+ L L KEL+ LE +L+ + +IRS + +++L ++ Q++E L + L+ ++ E Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISS---QQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLME 175
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36 Identity = 80/177 (45.20%), Postives = 124/177 (70.06%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS-NSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER 628 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFSS+G+L+EYS +S + ++RY + + ++ + E AKL+ ++++L+ + R+ MG+ L SL++KEL+ LE++L+ I IRS+K++ + I LQK++ L++ + L KI E E+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK 177
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.188e-36 Identity = 78/177 (44.07%), Postives = 123/177 (69.49%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS-NSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER 628 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FSS+G+L+EYS +S + ++RY + + ++ + E AKL+ ++++L+ + R+ MG+ L SL++KEL+ LE++L I IRS+K++ + I LQK++ L++ + L KI E E+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREK 177
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.188e-36 Identity = 77/160 (48.12%), Postives = 116/160 (72.50%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIEL 580 MGRGK+E+KRIEN RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS+ G+LYE+SN + TI+RY + C DN E + Q +QE KL+ + + L ++R+L+G+ L +++KEL+ LE +LE ++ R +K ++++ ++E L+++E EL Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYR-CKDNLLDNDTLE-DTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKEREL 158
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.470e-36 Identity = 78/194 (40.21%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN-SNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQELNAIHA 679 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+N S + ++RY++ + + E KL+ ++++LQ + +H +G+ L SL++KEL+ LE++L+ + IRS+K++++ I LQK++ L+ ++ L K+ E E+ A ++G +++ A Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREK--SAQQISGINSSSLFA 192
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.144e-36 Identity = 76/177 (42.94%), Postives = 122/177 (68.93%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN-SNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER 628 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+N S + ++RY++ + + E AKL+ ++++LQ + +H +G+ L SL +KEL+ LE++L+ + IRS+K++++ I LQK++ L+ ++ L K+ E E+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREK 177
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35 Identity = 76/194 (39.18%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS-NSNIRSTIDRYKK-ACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQELNAIH 676 MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EYS +S + ++RY++ + ++ +++N + E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IR++K++++ I LQK+E ++ ++ L +I E E+ +A + N H Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGH 193
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.631e-35 Identity = 76/170 (44.71%), Postives = 121/170 (71.18%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIK 610 M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+++++ + TI+RY+ +N + TV + + + + ++ L ++++ L+ R L+G+ L +++EL LE +LER + IR +K ++L ++ L+++E++L ++ LR K Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTVQQ-DIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREK 169
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 76/194 (39.18%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS-NSNIRSTIDRYKK-ACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQELNAIH 676 MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EYS +S + ++RY++ + ++ +++N + E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IRS+K++++ I LQ++E ++ ++ L +I E E+ +A + N H Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGH 193
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.120e-34 Identity = 74/177 (41.81%), Postives = 121/177 (68.36%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER 628 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY ++S + ++RY++ + + E+AKL+ ++++LQ + + +G+ L SL +KEL+ LE++L + IRS+K++++ I LQK++ L+ ++ L K+ E E+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREK 177 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |