FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA1_CAEEL (Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALL 639 +YD +TV+SP G L QVEYA+EA+++G+A VG++ V+ K++ L + +K+ +D H ++ AGL +D R+L + EC S R + V ++ + + Q TQ G RPFG+ LI G+D + QTDPS + + G S S R +LE+N +L + ALL Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYD--KDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALL 193
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 1 Query: 85 FSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK-NYKETSGQETIKLAIRAL 636 FSPDG LFQ EYA +AV + +G++ D ++L +EK T KL R +I S+D HI +A G D + ++ RAR E S R P+ I + Q +T VRPFG+ + + +D + P LY +P+G + + A G+ R LEK N+ ++ +K A R L Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYD--SEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAARIL 196
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16 Identity = 59/206 (28.64%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK-NYKETSGQETIKLAIRALLEV-VESGGKNIEV 675 YD A + FSPDG +FQVEYA +AV + +RG + +V+ +K + KL + ++ ++++++ +A AG D L N A E +P+ ++ I +A +T G RPFG + ++ TG L+ +PSG +KA A G++ + + +EK +E + +K A R ++ V E+ KN+++ Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAFFMSWNKQTG-GRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEAARIIMVVRDENKDKNVQI 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 59/173 (34.10%), Postives = 88/173 (50.87%), Query Frame = 1 Query: 85 FSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVL-GVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQS--HRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 594 F+ +G L QVE+A++ V + +G +D +VL GV K+ T + + KI L + I GL DA L ARI+ Q R VE P+T + +++ +Q +TQ G RPFG+S L G G +L TDPSGT + WK G N ++ L+ ++ E Sbjct: 11 FTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPT-----NGPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTT--LCKFVGQRKQAFTQYAGTRPFGVSFLYAGV--IDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPE 174
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15 Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPY----TGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-----SGQETIKLAIRAL 636 A +D+ ITVFSP+G L+QVEYA +AV G V +R D +++ + KL ++ + +++++ + G D + L+ +AR E ++ P+ V + + + Q TQ G+R G VG + +P +Y DP+G +A A A G+ FLEK K S +E +A+ AL Sbjct: 4 AGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGG-AAVHACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAAL 205
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 55/189 (29.10%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 139 KGNAAVGVRGTDTIVLGVEKKSTV-KLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDP-SGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVE---SGGKNIEVAVMT 687 KG VGV TD IVL E+++T+ S++ +K+ +D+ + + AG DA+ L+ +E Q +++ ++ +T++ IT L + P + LI G D P +Y D G+ + +ATG S LE Y+E + +E + LAIRA+ + + G+NI+V V+T Sbjct: 8 KGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITT----LMSNFLSRNRYYPMMVQLLIGGVD--KNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVIT 190
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 1 Query: 139 KGNAAVGVRGTDTIVLGVEKKSTV-KLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES---GGKNIEVAVMT 687 KG VG+ D +V E+++++ L ++ KI +D HIA AG ADA+ L+ + E +R+ + +++E A L S PF + TL+ G D +Y DPSG K +TG S LE Y E E + +AIRA+ +E G I VA +T Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIE----AAAALAANILHSSRFYPFIVQTLLGGVD--ENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVT 189 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |