FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39 Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV G +VG++ + +VL EKK L D RSV K+ + HI L +G+ D RVL++RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G++ G P L+Q+DPSG + AWKA A G+N + + FLEK Y E ++ I AI L E E NIEV + Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWN--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGI 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38 Identity = 85/197 (43.15%), Postives = 124/197 (62.94%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVE 651 YDRAITVFSPDG L+QVEYA EAV++G AVG++ ++ +VL V+K+ T +L + S+ KI +D HI +A +GL DAR L++RAR+E Q +R++ +P+ VE + + + Q YTQ GG RP+G + LI G G L++TDPSGT +KA G ++ + E Y+E + I+L I+AL E Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVS--DGEARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIKALHAATE 203
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.062e-38 Identity = 91/211 (43.13%), Postives = 127/211 (60.19%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVA 678 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ D +VL VEK+ T L + SV KI+ +D HI A +GL ADAR L+ AR+E Q+HR + +P+TVE T+ I L ++ + RPFG+S LI G D PSLY TDPSGTF A A G S L++ Y KE + QE +A+ L +V+E N+++A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIA 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38 Identity = 81/200 (40.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKST-VKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES 654 RYD T+FSP+G L+QVEYALE++ A+G+ +D IVL E+K T L+ S K+ L++ IA+A AGL ADA +LIN ARI Q++ T + + VE + R ++ ++Q YTQ GG+RPFG+S + G+D G LY ++PSG ++ WKA + G N+++ + L+ +YK + + I+LA++ L + +S Sbjct: 5 RYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGY-QLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDS 203
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38 Identity = 89/211 (42.18%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVA 678 YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ + +VL VEK+ T L + SV KI+ +D+HI A +GL ADAR L+ AR+E Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D PSLY TDPSGTF A A G S L++ + K+ S QE +A+ L +V+E N+++A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEEKVTPNNVDIA 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.337e-37 Identity = 88/209 (42.11%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV G +VG++ ++ +VL EKK L D +SV KI + HI + +G+ D RVL+ RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G+D P L+Q+DPSG + AWKA A G++ + + FLEK Y E ++ I AI L E E +NIEV + Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWD--EDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEENIEVGI 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37 Identity = 88/211 (41.71%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVA 678 YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ + +VL VEK+ T L + SV KI+ +D+HI A +GL ADAR L+ AR+E Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D PSLY TDPSGTF A A G S L++ + K+ + QE +A+ L +V+E N+++A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEEKVTPNNVDIA 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37 Identity = 86/210 (40.95%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 RY ++T FSP G L Q+EYAL AV G +VG+ ++ +V+ E K L + SV ++ + NHI + +G+ D R+L+ +AR Q++ LT ++P+ V + + +A L Q+YTQSGGVRPFG+S LI G+D P LYQ+DPSG + AWKA A G+N+ + + FLEK Y E + + AI L E E NIE+ + Sbjct: 5 RYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWD--NDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGFEGKMTADNIEIGI 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.663e-37 Identity = 78/215 (36.28%), Postives = 133/215 (61.86%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMRE-FLEKNYKETSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 YDR + FSP+G +FQ+EYA+EA++ G+ ++G++ D +++ EK+ L D SV KI+ +D+HI +G+ ADAR+L++ AR+E Q+HR T ++P++VE L ++ +SGG RPFG+S LI G D P L+QTDPSGT++ + A A G + + + F E+ ++ + +E L ++ L +V+E ++E+A++ Sbjct: 8 YDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVD--ENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEEKLTKTSVEIAIV 220
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 86/211 (40.76%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVA 678 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + +VL VEK+ T L + SV KI+ +D HI A +GL ADAR L+ AR+E Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D PSLY TDPSGTF A G S L++ + K+ + QE +A+ L +V+E N+++A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHD--ENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 216 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |