FC931546

Overview
NameFC931546
Unique NameFC931546
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9385 contig Ccv1_Contig9385:73..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_CANAL (Serine/threonine-protein kinase TEL1 OS=Candida albicans GN=TEL1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.651e-27
Identity = 54/128 (42.19%), Postives = 86/128 (67.19%), Query Frame = 3
Query:  111 TSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNE 494
            TS+ W E R  YT  +A  S+VG++LGLGDRH +N+++ R +G+ +HID G  F+    R   PE VPFRLTR +V    V+G+EG F+ +CE+ ++VLR+N++ ++++++    DPL +W L  F +
Sbjct: 2680 TSDSWFESRVKYTHGIATSSIVGHILGLGDRHCNNILIDRSTGEPIHIDLGVAFDQG-KRLAIPETVPFRLTRDIVDGFGVTGVEGMFKKSCEHTLRVLRTNKEHIISILDVLRWDPLYSWTLSRFKK 2806          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_DEBHA (Serine/threonine-protein kinase TEL1 OS=Debaryomyces hansenii GN=TEL1 PE=3 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26
Identity = 55/121 (45.45%), Postives = 82/121 (67.77%), Query Frame = 3
Query:  117 EIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 479
            +IW + RT+YTR +A  SMVG++LGLGDRH +N++L + SG+ +HID G  F+    R   PE VPFRLTR +V    ++G+ G F  +CE+  +VLR N+D ++A+++    DPL +W L
Sbjct: 2754 DIWFDTRTSYTRGIATTSMVGHILGLGDRHCNNILLDKTSGEPIHIDLGVAFDQG-KRLPIPETVPFRLTRDIVDGFGITGVNGVFDKSCEHTYRVLRQNKDHILAILDVLRWDPLYSWSL 2873          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATR_CANAL (Serine/threonine-protein kinase MEC1 OS=Candida albicans GN=MEC1 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26
Identity = 58/124 (46.77%), Postives = 81/124 (65.32%), Query Frame = 3
Query:  123 WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNE 494
            W   R  +TRS AVMSMVGY++GLGDRH  N+++ + +G +LHIDF DC          PE VPFRLT+ +V AM ++G++G +R TCE    +LR N   +M ++E  ++DPLI+WR  N  E
Sbjct: 2152 WYMARNAFTRSSAVMSMVGYIMGLGDRHCENILIFKNTGAVLHIDF-DCLFEKGTTLPTPEIVPFRLTQNMVDAMGITGVDGIYRITCEVTGTLLRENEQILMNILETLIYDPLIDWRNHNPRE 2274          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: SMG1_CAEBR (Serine/threonine-protein kinase smg-1 OS=Caenorhabditis briggsae GN=smg-1 PE=3 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.294e-26
Identity = 59/145 (40.69%), Postives = 88/145 (60.69%), Query Frame = 3
Query:   39 EVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473
            EVF+     T  + ++R +W+++  S  W      Y RSLAVMSMVG +LGLGDRH  NL++    G ++HID+  CF+      + PE VPFRL+R +  A+  S + G FR +C +V+  LRS    +  +++AFV DPL++W
Sbjct: 1904 EVFDGLCSKTPTDLISREIWMRANDSTAWWAVTKRYARSLAVMSMVGSVLGLGDRHLDNLLVDLKYGHVVHIDYNICFDKG-KILRIPETVPFRLSRNMRHALGPSDMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDW 2047          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATR_XENLA (Serine/threonine-protein kinase atr OS=Xenopus laevis GN=atr PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26
Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 3
Query:  123 WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473
            W   R+ Y RS AVMSMVGY+LGLGDRH  N++    +G+ +H+DF   F      E  PE VPFRLT  +V  M   G EG FR  CE +M+++R  R+S+M++++ F+HDPL+ W
Sbjct: 2460 WYNSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSLTGECVHVDFNCLFNKGETFE-VPEIVPFRLTHNMVNGMGPMGTEGLFRRACEVIMRLMREQRESLMSVLKPFLHDPLVEW 2575          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATR_ARATH (Serine/threonine-protein kinase ATR OS=Arabidopsis thaliana GN=ATR PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 3
Query:   96 WLKSRTSE--IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473
            W  +  SE   W   R  Y  + AV SMVG+++GLGDRH  N++    SG  +H+DF   F+  +  EK PE VPFRLT+ ++  + ++G EG F   CE  + VLR++R+++M+++E F+HDPL+ W
Sbjct: 2510 WFLTTFSEPAAWFRSRVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTSGDCVHVDFSCLFDKGLQLEK-PELVPFRLTQNMIDGLGITGYEGIFMRVCEITLTVLRTHRETLMSILETFIHDPLVEW 2636          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_YARLI (Serine/threonine-protein kinase TEL1 OS=Yarrowia lipolytica GN=TEL1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25
Identity = 52/123 (42.28%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  111 TSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 479
            +++ W + RTNY RS A  SM+GY+LG+GDRH +N+M+   +G+++HID G  F+   N    PEKVPFRLTR +V AM   G++G FR  CE  + + R  +D++++++    +DPL +W +
Sbjct: 2089 SAQAWFKARTNYVRSAAASSMLGYILGIGDRHCNNIMIDYKTGQLVHIDLGISFDQGKNL-TVPEKVPFRLTRDMVDAMGSVGVDGPFRRCCELSLGLFREQQDNILSILNVLRYDPLYSWTM 2210          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_DROME (Serine/threonine-protein kinase ATM OS=Drosophila melanogaster GN=tefu PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 3
Query:  120 IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEVPQMS 509
            +W ERR  YT S+A  SMVGY+LGLGDRH  N+++ + + +++HIDFG  FE     +  PE VPFRLTR  V  M + G +G F  +CE  M +LR  +     ++E  ++DPL  W +    + PQ S
Sbjct: 2578 VWFERRLAYTNSVATTSMVGYVLGLGDRHTQNILVDQQTAEVIHIDFGIAFEQG-KIQTTPETVPFRLTRDFVAPMGICGTKGVFAKSCEATMHILRRYKSVFTTILEVLLYDPLFIWGVLKKKQSPQQS 2706          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATR_HUMAN (Serine/threonine-protein kinase ATR OS=Homo sapiens GN=ATR PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 4.747e-25
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 3
Query:  123 WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473
            W   R+ Y RS AVMSMVGY+LGLGDRH  N++    +G+ +H+DF   F      E  PE VPFRLT  +V  M   G EG FR  CE  M+++R  R+ +M++++ F+HDPL+ W
Sbjct: 2450 WYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSLTGECVHVDFNCLFNKGETFE-VPEIVPFRLTHNMVNGMGPMGTEGLFRRACEVTMRLMRDQREPLMSVLKTFLHDPLVEW 2565          
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATR1_DICDI (Probable serine/threonine-protein kinase atr1 OS=Dictyostelium discoideum GN=atr1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 52/115 (45.22%), Postives = 79/115 (68.70%), Query Frame = 3
Query:  123 WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLI 467
            WL+ R  + RS A+MSMVG +LGLGDRH  N++L   +G+ +HID+ +C          PE+VPFRLTR +V    V G+EG F++ CEN ++VLRSN++ ++ ++E F++DP +
Sbjct: 2967 WLDARDAFARSCAIMSMVGSVLGLGDRHTENILLDSITGECVHIDY-NCLFWKGETFTVPERVPFRLTRNMVDVFGVLGVEGTFKTVCENTLRVLRSNKEVLLRVLENFIYDPFL 3080          
The following BLAST results are available for this feature:
BLAST of FC931546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ATM_CANAL8.651e-2742.19Serine/threonine-protein kinase TEL1 OS=Candida al... [more]
ATM_DEBHA1.130e-2645.45Serine/threonine-protein kinase TEL1 OS=Debaryomyc... [more]
ATR_CANAL3.287e-2646.77Serine/threonine-protein kinase MEC1 OS=Candida al... [more]
SMG1_CAEBR4.294e-2640.69Serine/threonine-protein kinase smg-1 OS=Caenorhab... [more]
ATR_XENLA7.324e-2647.01Serine/threonine-protein kinase atr OS=Xenopus lae... [more]
ATR_ARATH2.783e-2541.41Serine/threonine-protein kinase ATR OS=Arabidopsis... [more]
ATM_YARLI3.635e-2542.28Serine/threonine-protein kinase TEL1 OS=Yarrowia l... [more]
ATM_DROME3.635e-2542.31Serine/threonine-protein kinase ATM OS=Drosophila ... [more]
ATR_HUMAN4.747e-2546.15Serine/threonine-protein kinase ATR OS=Homo sapien... [more]
ATR1_DICDI8.097e-2545.22Probable serine/threonine-protein kinase atr1 OS=D... [more]

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Properties
Property NameValue
Genbank descriptionC34106C09EF PostHarvP1 Citrus clementina cDNA clone C34106C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931546 ID=FC931546; Name=FC931546; organism=Citrus clementina; type=EST; length=716bp
CACCAGATTATGACCATTTGCCTCTCATAGCCAAAGTGGAAGTTTTTGAA
TATGCTCTACAAAATACTGAAGGGAATGATCTGGCCAGGGTGCTTTGGTT
AAAAAGCCGTACTTCTGAAATATGGCTAGAGAGGAGGACGAACTATACCA
GAAGTTTAGCAGTGATGAGCATGGTTGGATACCTTCTTGGTTTAGGGGAT
CGGCACCCAAGTAATCTTATGCTGCACCGCTATAGTGGGAAAATTTTACA
CATAGATTTTGGGGACTGCTTTGAAGCTTCAATGAACCGGGAGAAGTTCC
CTGAAAAGGTTCCTTTTCGCTTGACTAGAATGCTTGTTAAAGCTATGGAG
GTTAGTGGTATTGAGGGCAACTTCCGTTCAACATGCGAAAATGTGATGCA
AGTTCTGCGCTCAAATAGGGATAGTGTTATGGCTATGATGGAGGCCTTTG
TTCATGATCCTCTCATCAATTGGCGTCTTTTCAATTTTAATGAAGTACCG
CAAATGTCAGTGTTTGCAAATACTCATGTCCCTCCTGTTGTGAATGCCGA
AGAAACTGCTCCAAATAGAGAACTTCCTCAACCACAACGGGGTGCTCGTG
AAAGGGAGCTTCTTCAGGCTGTTAATCAACTTGGTGATGCTAGTGAGGTT
TTGAATGGGCGTGCTGTGGTTGTCATGGCTCGGATGAGTAATAAGCTACA
GGACGTGATTCTCATC
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