FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.094e-21
Identity = 54/136 (39.71%), Postives = 78/136 (57.35%), Query Frame = 1
Query:  202 KKRGP---PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +KR P   P     WP+IG+L  LG  P H+    MA  YGP+  ++MG    +V ++  +A + L THD  F+SRP    AE + +N+    F+PYGP WR +RKI ++ L S   L+  +HVR+ EVKT  + L
Sbjct:   26 RKRYPLPLPPGPKPWPIIGNLVHLGPKP-HQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRAL 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            S  KK   P +    P+I +LH LGR P HR L  ++ +YGP+  +  G    LVVS+ + AK+ L THDRVFASRP++ + + + +N      +PYG +WRQ++ +  L L SN  +   + VR+ E+   ++++
Sbjct:   26 SRGKKSNAPPSPPRLPLIRNLHQLGRHP-HRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKI 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 52/136 (38.24%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            S  K + PP   G  P+IG+LH LG+  LHR    ++  YGP+  +  GV   +VVS  E A+E L THD    +RPK    ++  +N+   GF+ YG  WR++RK+A LEL S+ +L+  +++RE E +  + +L
Sbjct:   22 SPSKGKLPPGPLGL-PIIGNLHQLGK-SLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKL 155          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 1
Query:  199 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +K+R  P      P IG+LH LG  P H+ L  +++K+GP+  +++G    LVVS+ EMA+E    HD VF+ RP    A  LG+  S   F+PYG +WR++RKI  LELLS  R++  + VR  EVK  L+ +
Sbjct:   28 EKRRLLPPGPRKLPFIGNLHQLGTLP-HQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYG-STVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTI 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  181 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            RN + N +    P     WP+IG+L  +G  P HR L  M   YGPI  +R+G    +V ++  +A++ L  HD  FASRP    A+ + +N+    F+PYG  WR +RKI+++ L S   LE  KHVR+ EV T  +EL
Sbjct:   25 RNRSHNNRL---PPGPNPWPIIGNLPHMGTKP-HRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTREL 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 50/131 (38.17%), Postives = 81/131 (61.83%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVA-EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            GPP+     P++G+ H L     H +L D+A KYGP+  +++G    +V S+ ++A+E   THD +FA RP  L + +I+ ++FS    SPYG +WRQ+RKI+ +ELLS   ++  + +RE EV   +K +
Sbjct:   29 GPPQI----PILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI 155          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            SN  K+ PP      P+IG+LH LG  P HR L  ++ KYGP+  + +G    +V S+ E  ++ + T+D V+++RPK+ +A+ L +      FSP+G +WRQIR I  L LLSN R++  +  RE E    +++L
Sbjct:   19 SNNNKKLPPSPRKL-PIIGNLHQLGLHP-HRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKL 152          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20
Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLH-RVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDR 618
            P+IG+LH   R  LH R   ++++KYGPI  +R G    +V+S+ E A+E L THD    SRP+ +    + +NF   GF+PYG  WR +RK++ +EL S+ +L+  +++RE E   C+K+L D   R
Sbjct:   36 PIIGNLHQ--RRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASR 161          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  181 RNYASNKKKRGPPEAGGAW--PVIGHLH---LLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELY 603
            + Y      + PP   G W  P+IG+LH   L    P  + L  +  KYGP+  +++G    LVVS+ +MA E + THD  F  RP+ L  + + +  +   F+PYG +WRQIRKI TLELLS  R++   H+R+ E K  ++ ++
Sbjct:   23 KTYKQKSSHKLPP---GPWRLPIIGNLHQLALAASLP-DQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIH 164          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAW--PVIGHL-HLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            S+ KKR PP   G W  P++G L HLL   P    L ++A KYGP+  +RMG    +VVS+   A+E L   D +FASRP  LV+EI  ++    GF+PYG +WR +RK+ T+ELLS   + +L  VR  E  T ++ +
Sbjct:   53 SSSKKRRPP---GPWNLPLVGGLLHLLRSHP-QVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNI 187          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
F3PH_PETHY7.094e-2139.71Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71AO_ARATH9.264e-2136.76Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.580e-2038.24Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN1.580e-2041.79Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
F3PH_ARATH2.064e-2039.29Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71DC_CATRO2.064e-2038.17Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71A3_SOLME2.064e-2038.24Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71BS_ARATH2.696e-2039.84Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN4.598e-2036.99Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C99A2_ORYSJ6.005e-2042.45Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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