FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  178 SRNYASNKKKRGPPE---AGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            SRN + + K  G P         P++G+LHLLG  P H+ L ++A +YGP+  +R+G    +VVS+ E A+E L  HD    SRP +   + L ++    GF+PYG +WR++RK+  LELLS  R++   + RE E+   + +L
Sbjct:   40 SRNRSRSGKLGGAPRLPPGPAQLPILGNLHLLGPLP-HKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADL 182          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P+IG+LH LG+  LHR    ++ +YGP+  +R GV   +V S  E A+E L THD    +RPK     +  +NF   GF+ YG  WR++RK+A LEL S+ +L+  +++RE E +  +K++
Sbjct:   36 PIIGNLHQLGK-SLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKV 155          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P+IG+LH LG  P HR L  ++ KYGP+  +  G    +V S+ + A++ + THD V+ASRPK+ + + L +     GFSP+G +WR+ + I  L LLSN R++  ++VR  E    + ++
Sbjct:   45 PIIGNLHQLGSLP-HRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKI 164          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  175 VSRNYASNKKKRGP---PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            VS  + + K KR     P +   +PVIG+LH +G  P HR L  +A++YGP+  +  G     VVS+ E A+E L THD    SRPK +   +L  +F   GF+PYG  W+  RK A  EL    +++  +H+RE E    +K+L
Sbjct:   14 VSLIFFAKKIKRSKWNLPPSPPKFPVIGNLHQIGELP-HRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 55/138 (39.86%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAW--PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            S+ KKR PP   G W  P++G L  L R      L D+A KYGP+  +R G    +V+S+   A+E L   D  FASRP  LV+EI  +     GF+PYG +WR +RK+ T+ELLS   + +L  +R+GE    ++ +
Sbjct:   29 SSSKKRRPP---GPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNI 163          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 55/131 (41.98%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  214 PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD 606
            PP   G WP+IG L LLG  P H  L DMA KYGPI  +++G    +V SN + A+  L THD  F++RP       L +N     F+ YGP W+ +RK+ +L +L    LE   HV+  EV   LKE+Y+
Sbjct:   39 PPGPTG-WPIIGALPLLGTMP-HVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYE 167          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  181 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            R+Y+       PP+     PV+G+LH LG FP HR L  ++ +YGP+  +  G    LV S+ E A+E +   D  F++RP   +   L ++     F+PYG +WRQIR I  L+LLSN R++  + VRE E    ++++
Sbjct:   20 RSYSGKTPPPSPPKL----PVLGNLHQLGTFP-HRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKI 154          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19
Identity = 53/142 (37.32%), Postives = 83/142 (58.45%), Query Frame = 1
Query:  181 RNYASNKKKRGPPEAGGAW--PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            R  +   KK+ PP   G W  P+IG+L  L     H  L D+A K+GP+  +R+G   A+V+S+   A+E L   D  FASRP  LVA+I+ +      F+PYG +WR +RK+   ELL+ H++ +L  VR+ E  + ++++
Sbjct:   17 RKPSPGSKKKRPP---GPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKV 155          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19
Identity = 54/136 (39.71%), Postives = 78/136 (57.35%), Query Frame = 1
Query:  196 NKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVA-EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            NK K   P +    P+IGHLHLL   P H+    ++ +YGPI  + +G    +V S  E AKE L TH+  F++RP   VA E L + F  F F+PYGP+W+ ++K+   ELL  H L++   VR+ E K  +K +
Sbjct:   25 NKNKTLLPPSPMPLPIIGHLHLLSPTP-HQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRV 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19
Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  175 VSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKY-----GPIFTIRMGVHRALVVSNWEMA-KECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +S  +   KK+  PP   G  P+IGHL LL + P+HR L   ++       G + ++R+G     VVS+ ++A +EC   +D V A+RP+ ++ + +G+N +    +PYG HWR +R++ T+E+ S HRL    +VR  EV+  +  L
Sbjct:   21 ISFKFLKPKKQNLPPSPPGWLPIIGHLRLL-KPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRL 167          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C71E1_SORBI6.005e-2037.504-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BL_ARATH6.005e-2039.67Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME6.005e-2038.02Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71BJ_ARATH7.843e-2037.93Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ1.024e-1939.86Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C75A6_CAMME1.024e-1941.98Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71A6_NEPRA1.338e-1936.43Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C99A1_SORBI2.282e-1937.32Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C93A3_SOYBN2.282e-1939.71Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C81D1_ARATH2.282e-1934.46Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
back to top