FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  217 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P +   +PVIG+LH +G  P HR L  +A++YGP+  +  G     VVS+ E A+E L THD    SRPK +   +L  NF    F+PYG  W+  RK A  EL    +++  +H+RE E    +K+L
Sbjct:   31 PPSPPKFPVIGNLHQIGELP-HRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  199 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGP--IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD 606
            K+ R PP   G  P+IGHLHL+G  P H    D+  KYG   +  +++G    +VVS  + A+  L THD V ASRP+  VA+I+ +N +   F+PYG +WR  RK+    LLS   +   +  RE EV+  +  + D
Sbjct:   51 KQHRLPPTPPGKLPIIGHLHLIGSHP-HVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRD 187          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 50/140 (35.71%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  181 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            RNY     +R PP   G  P+IG+LH LG  P H+ L  ++ KYGP+  +++G    ++VS+ E AK+ L  HD    SRP    A  L +N+    FSPY  +W+++RK+A  EL S+ ++  ++ +++ EVK  +  +
Sbjct:   26 RNY-----QRTPPSPPGC-PIIGNLHQLGELP-HQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSI 158          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 46/128 (35.94%), Postives = 79/128 (61.72%), Query Frame = 1
Query:  217 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P +  + P+IG+LH L   P HR    ++ KYGP+  +R+G    +V+S+ E A+  L T+D    SRPK + +  L + F    F+PYG +WR++RK+A +EL S+ +++  +++RE EV   +K++
Sbjct:   32 PPSPSSLPIIGNLHHLAGLP-HRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKV 158          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 1
Query:  199 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD 606
            +++R PP   G WPVIG L LLG  P H  L  MA KYGPI  +++G    +V S    AK  L T D  F++RP    A  + +N     F+PYGP W+ +RK++ L +L    LE   +VR  E+   LK ++D
Sbjct:   32 RRRRLPPGPEG-WPVIGALPLLGGMP-HVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFD 165          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 50/143 (34.97%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  178 SRNYASNKKKR--GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +R   S+K K   GPP+     P+IG+LH L   P H+ L ++   +GP+  +++G    +V+S+ + A+E L THD    SRP+ + ++ + +NF   GF+PYG  WR +RK+A +EL S  +    +++RE E    +K+L
Sbjct:   21 TRKSQSSKLKLPPGPPKL----PIIGNLHYLNGLP-HKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKL 158          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 45/121 (37.19%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P+IG+LH L + P HR L  ++ +YGP+  +  G    +V S  E A++ L THDRVFASRP++ + E L +       +PYG +WRQ++ ++ L LLSN  +   + VR+ E+   ++ +
Sbjct:   37 PLIGNLHQLSQHP-HRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETI 156          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  199 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            + K+  P      P+IG+LH L    LH+ L D++ K+GP+  +R+G    +V+S+ E A+E L THD    SRP  + + +   N    GF  YG  WR++RK++  E  S  +++  K++RE E    +K+L
Sbjct:   27 ESKQNLPPGPAKLPIIGNLHQLQGL-LHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKL 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 47/119 (39.50%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGP-IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCL 591
            P+IGHLHL+G  P +  L  +A +YGP +  +R+G    +VVS+  +A+  L T+D VF+SRP++LV++I+ +  +   F+PYG H+R+ RK+ T+ LL+  ++   +  RE EV+  L
Sbjct:   76 PIIGHLHLMGDIP-YVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGAL 193          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 41/121 (33.88%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P+IG+LH L   P H    +++ K+GP+  +  G    +V+S+ E A+E L T D    SRP+ +   ++ +NF   GF+PYG  W+ +RK+  +ELL+  + +  +++RE E    +K+L
Sbjct:   40 PIIGNLHNLTGLP-HTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKL 159          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C71BK_ARATH3.892e-1939.06Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE5.084e-1938.41Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BV_ARATH5.084e-1935.71Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH5.084e-1935.94Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C75A2_SOLME8.671e-1939.71Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71BN_ARATH8.671e-1934.97Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH3.295e-1837.19Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH5.621e-1834.33Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE7.341e-1839.50Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71B7_ARATH7.341e-1833.88Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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