FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH L   P HR L  ++ +YGP+  +  G    LVVS+ E A+E L THD  FA+RP++     L        F+PYG +WRQ++ +  L LL+N  +E  + VRE EV   +++L
Sbjct:   41 PVIGNLHQLSLHP-HRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKL 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 43/135 (31.85%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  190 ASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLK 594
            +  K K+  P      P+IG+LH LG  P HR + +++  YGP+ ++++G    +V ++ E  ++ L T+D    SRP       + +N     FSPY  +WRQ+RK+  +EL +  R++  +H+RE EV + ++
Sbjct:   21 SKRKPKKNLPPGPPRLPIIGNLHQLGEKP-HRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVR 154          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 46/126 (36.51%), Postives = 73/126 (57.94%), Query Frame = 1
Query:  205 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVK 582
            +R PP   G +P+IG+LH LG  P H+ L  ++ KYGP+  ++ G    +VVS+ E AK+ L  HD    SRP       L +N+    FSP+  +W+++R++   EL S  ++  ++ +RE EVK
Sbjct:   29 QRKPPSPPG-FPIIGNLHQLGELP-HQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVK 152          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 49/131 (37.40%), Postives = 75/131 (57.25%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            GPP+     P++GHLHLL G+ P H  + DMA KYGP+  +++G   ++V+S+ E  KE +   D   A R +++   I+ ++     FSPY  HWRQ+RKI   ELLS   +     +R+ E+   L+ L
Sbjct:   37 GPPKL----PLVGHLHLLWGKLPQH-AMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHL 162          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 49/131 (37.40%), Postives = 75/131 (57.25%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            GPP+     P++GHLHLL G+ P H  + DMA KYGP+  +++G   ++V+S+ E  KE +   D   A R +++   I+ ++     FSPY  HWRQ+RKI   ELLS   +     +R+ E+   L+ L
Sbjct:   37 GPPKL----PLVGHLHLLWGKLPQH-AMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHL 162          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD 606
            GPP      P++G++H LG  P HR L D++ KYGP+ T+ +G  R +VV + E A+E L  HD    +RPK  + +   ++    GF+ +G ++R +RK+  LEL S  R    +++RE E+   +    D
Sbjct:   39 GPPRL----PILGNIHQLGSLP-HRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSD 165          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 1
Query:  202 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            KK   P +    PVIG+LH L   P HR L  ++ +YGP+  +  G    LVVS+ E A E L THD  FA+RPK+     L        F PYG +WRQ++ +  L LL+N  +   + VRE EV   +++L
Sbjct:   29 KKVNLPPSPWRIPVIGNLHQLSLHP-HRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKL 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  205 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVK 582
            +R PP   G +P+IG+LH LG  P H+ L  ++ KYG +  ++ G    +VVS+ E AK+ L  HD    SRP       L +N+    FSP+  +W+++R+I   EL S  R++  + ++E EVK
Sbjct:   29 QRKPPSPPG-FPIIGNLHQLGELP-HQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVK 152          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEV 579
            + K K+  P      P+IG+LH LG  P H  +  +++KYGP+  +R G    +V S  E  KE L T D    SRP       L +N    GF PY  +WR++RK+  +EL +  R++  +H R+ EV
Sbjct:   22 TRKTKKNLPPGPPRLPIIGNLHQLGSKP-HSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEV 149          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 50/139 (35.97%), Postives = 77/139 (55.40%), Query Frame = 1
Query:  217 PEAGGAWPVIGHLHLLG--RFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDRTNN 627
            P     WPV+G+L+ +   RF   R   + A  YGPI ++  G    ++VSN E+AKE L  HD++ A R ++  A     +     ++ YGPH+ ++RK+ TLEL S  RLE L+ +RE EV + +  +Y+    T N
Sbjct:   29 PPGPRPWPVVGNLYDIKPVRF---RCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTEN 164          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C71AD_ARATH9.587e-1840.50Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.635e-1731.85Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BY_ARATH2.789e-1736.51Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP3.643e-1737.40Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR3.643e-1737.40Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71B6_ARATH4.758e-1734.85Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH6.214e-1739.10Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH8.116e-1736.51Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH8.116e-1735.66Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN1.060e-1635.97Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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