FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            GPP+     P+IGHLHLL G+ P H  L  +A +YGP+  +++G   ++V+S+ E  KE +   D   A+R +++   I+ ++     FSPY  HWRQ+RKI   ELLS+  +     +R+ EV   L+ L
Sbjct:   38 GPPKL----PLIGHLHLLWGKLPQH-ALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHL 163          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  214 PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGP--IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEV 579
            PP   G  P++GHLH +G    H  L ++  KYG      +R G    L+VS+   A+  + THD + ASRP ++ + IL +N     FSP G +W+Q RK+    LLSN ++   +H RE EV
Sbjct:   57 PPSPPGTLPIVGHLHHIGP-QTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEV 179          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  202 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDF 609
            +K+ PP   G  P+IG+LH LGR  LH  L  ++ ++GP+  +R GV    V S+ E AKE L THD    +RPK +   +    +   GF+ YG  WR+++K   LEL S  + +  +++RE E    +K++ ++
Sbjct:   25 RKKLPPGPTGL-PLIGNLHQLGRL-LHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNY 158          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 47/133 (35.34%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  196 NKKKRG----PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVK 582
            +KK+R     PP   G +P+IG+LH LG  P H+ L  ++  YGP+  +++G    +VVS+ E AK+ L  +D    SRP    A+ L +N+    FSP+  +W+++R+I   EL S  R+  ++ ++E EV+
Sbjct:   22 HKKRRTNQQQPPSPPG-FPIIGNLHQLGELP-HQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVR 152          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDRTNNYXSSD 642
            + K  R PP   G  P+IG+LH + +F     L  ++  YGPIFT+++G  R  V+S+ E+AKE L T D  F +RP     + + +     GF  Y  ++R++RK+  + L S +R+   + VRE E +  + ++Y   D++     S+
Sbjct:   23 TKKSLRLPPGPKGL-PIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSE 171          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16
Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  205 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD 606
            +R PP   G WP++G L LLG  P H    +MA KYG +  +++G H   + S  + AK  L T D  F++RP    A  L +N     F+ YGP W+ +RK++ L +L    LE    VR+ E+   LK +++
Sbjct:   39 RRLPPGPTG-WPILGALPLLGNMP-HVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFE 170          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  190 ASNKKKRG-----PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGP--IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            ++NK+K+      PP   G  P+IGHLHL+G    H  + D+  K+G   +  +R+G    L VS+   A   L T D +FASRP  + AEI+ +  S   F PYG + RQ RK+ T  +LS  +++  +H R+ EV+  + ++
Sbjct:   46 SANKRKQQQRLPLPPWPPGKLPIIGHLHLIGA-ETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKI 188          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 43/125 (34.40%), Postives = 72/125 (57.60%), Query Frame = 1
Query:  202 KKRGPPEAGG--AWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVRE 570
            ++R PP   G   WP+IG++ ++ +   HR L ++A KYG +  +RMG      VS+ E+A++ L   D VF++RP  +    L ++ +   F+ YGP WRQ+RK+  +++ S  R E    VR+
Sbjct:   34 RRRRPPYPPGPRGWPIIGNMLMMDQLT-HRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRD 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  205 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD 606
            +R PP   G WPVIG L LLG  P H  L  MA KYG I  +++G    +V S  + AK  L T D  F++RP    A  L +      F+ YGP W+ +RK++ L +L    LE   +VR  E+   LK ++D
Sbjct:   31 RRLPPGPRG-WPVIGALPLLGAMP-HVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFD 162          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P+IG+LH L   P HR L  ++ +YGP+  +  G    LVVS+ E A+E L THD  FA+RP++     L        F PYG +WRQ++ +  L LL+N  +   + +RE E+   +K+L
Sbjct:   41 PLIGNLHQLSLHP-HRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKL 160          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C71DF_MENPI1.060e-1637.40Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71C3_MAIZE1.384e-1637.90Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71BU_ARATH1.384e-1635.29Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.384e-1635.34Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH1.808e-1632.00Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C75A4_GENTR3.084e-1635.82Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71C2_MAIZE3.084e-1635.42Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C84A1_ARATH4.028e-1634.40Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C75A3_PETHY4.028e-1638.81Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71AC_ARATH4.028e-1638.02Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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