FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 46/139 (33.09%), Postives = 77/139 (55.40%), Query Frame = 1
Query:  187 YASNKKKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +  +K ++  P +    PVIGHLH L G  P H V   +A KYGP+  +++G   ++V+S+ E AK+ +   D  FA R   + +  + ++     FSPY  HWRQ+R+I   ELLS   +    ++R+ E++  ++ L
Sbjct:   25 WRKSKSQQNLPPSPPKLPVIGHLHFLWGGLPQH-VFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLL 162          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 46/139 (33.09%), Postives = 77/139 (55.40%), Query Frame = 1
Query:  187 YASNKKKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +  +K ++  P +    PVIGHLH L G  P H V   +A KYGP+  +++G   ++V+S+ E AK+ +   D  FA R   + +  + ++     FSPY  HWRQ+R+I   ELLS   +    ++R+ E++  ++ L
Sbjct:   25 WRKSKSQQNLPPSPPKLPVIGHLHFLWGGLPQH-VFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLL 162          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEV 579
            GPP      P+IG+LH LG  P  R L  +++KYG + +++ G   A+V S  E  K+ L T D    SRP       + +NF+   FSPY  +WR++RK+  +EL +  R++  ++VR+ EV
Sbjct:   32 GPPRL----PIIGNLHQLGSKP-QRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEV 149          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH L     HR L  ++ +YGP+  +  G    L+VS+ ++A + + THD V A+RPK  V + +        F+PYG +WRQ++ I    LL+N  +   + +RE E+K  +++L
Sbjct:   40 PVIGNLHQLS-LHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKL 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 43/142 (30.28%), Postives = 77/142 (54.23%), Query Frame = 1
Query:  175 VSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            V+  ++  +  R PP   G  P+IG+LH LG  P H+ L  ++ KYGP+  +++G    ++VS  E AK+ L  +D    SRP       L +N+    FS +  +W+++RK+   EL  N R+  ++ ++E E++  +  +
Sbjct:   18 VAVKHSKRRWVRQPPSPPGL-PIIGNLHQLGELP-HQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSI 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH L   P HR L  ++ ++GP+  +R G    L+VS+ ++A + + THD  FA+RP    A  +        F+PYG +WR ++ + T+ LLSN  ++  +  RE E+   ++ L
Sbjct:   40 PVIGNLHQLSLHP-HRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 45/140 (32.14%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  181 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            R Y     K  PP      P+IGH+H+LG   LH+   +++ +YGP+F++  G    +V S    AK+ L T++  F  R ++   + L +  S+  F+PYG +WR I+K++  ELL +  +   +H+R  E    L+ L
Sbjct:   22 RPYFHRYGKNLPPSPFFRLPIIGHMHMLGPL-LHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYESSL-AFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLL 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            GPP+     P IG+LH L   P      ++  KYGP+  +R G    +V+S+ E A+E L  HD    SRP+      + +NF   GF+PYG  W+ +RK++ +EL +  + +  + +RE E    +K+L
Sbjct:   31 GPPKL----PFIGNLHQLQELPPR----NLNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKL 152          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 45/132 (34.09%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  202 KKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLK 594
            +++ PP+     PVIGHLHLL G  P   +L  +A +YGP+  +++G   ++V+S+ E AK+ +   D  FA R  ++ + I+ ++     FSPY  HW Q+RKI   ELLS   +     +R+ E++  ++
Sbjct:   31 QQKQPPKL----PVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIR 158          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASR-PKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVK 582
            GPP      P+IG++HL+GR P H    D++  YGPI +++ G    +VV++ E A+E L T+D++ +SR P   +  I     S+    P    WR +RK++  +L S  R+E  K +RE +VK
Sbjct:   41 GPPRL----PIIGNIHLVGRNP-HHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVK 160          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C71DI_MENSP1.531e-1533.09Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.531e-1533.09Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BE_ARATH1.531e-1536.59Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH1.531e-1535.54Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH1.999e-1530.28Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH2.611e-1534.71Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC4.453e-1532.14Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71BT_ARATH4.453e-1533.85Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR5.816e-1534.09Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C76C2_ARATH5.816e-1536.00Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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