FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus amyloliquefaciens (strain FZB42) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52
Identity = 104/215 (48.37%), Postives = 143/215 (66.51%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D ++R+ + +V+  A+H+LF   + IRP ++E +    P FTI +A  F  +  T    S T I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ IL +H   N+G+ GDVA               D +R LIGDDEH WSD+GV NIEGGCYAKCI+LS EKEP I+ AI+FG+VLEN+V DE T E DY +   TENTRAAYPIE I
Sbjct:  114 DEKYRLPITVVNEFAWHNLFARQLFIRPETDERDTQAQP-FTILSAPHFKADPETDGTHSETFIIVSFEKRVILIGGTEYAGEMKKSIFSIMNFLLPQQDILPMHCSANVGEKGDVALFFGLSGTGKTTLSADADRKLIGDDEHGWSDSGVFNIEGGCYAKCINLSEEKEPQIFRAIRFGSVLENVVLDEKTGEADYDNSFYTENTRAAYPIEMI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STACT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus carnosus (strain TM300) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.984e-52
Identity = 101/215 (46.98%), Postives = 146/215 (67.91%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D + ++++ +V+  A+H+LF HNM IRP+S++  +   P+FTI +A  F  N       S T + I+   + ++I GT+YAGEMKKG+FS+M+YL+P++ I+S+H   N+G+ GDVA                 +R LIGDDEH W+ NG+ NIEGGCYAK I+LS+EKEP I++AI++GT+LEN+V +E    VD+ D   TENTRAAYPI+YI
Sbjct:  116 DQDTQLRLTVVNEMAWHNLFAHNMFIRPSSKDEAEKIKPNFTIVSAPHFKANPEEDGTASETFVIISFKHRIILIGGTEYAGEMKKGIFSVMNYLLPQQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYDAIRYGTILENVVVEE-DGNVDFDDNKYTENTRAAYPIDYI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RUBXD (Phosphoenolpyruvate carboxykinase [ATP] OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.984e-52
Identity = 102/216 (47.22%), Postives = 139/216 (64.35%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQ-ILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +R+ V++V   A+ +LF   +  RP+ EEL+ F  PD+T+ +      +       S T + I+  R+ ++I GT+YAGE+KK +FS++++++P    +  +H   N+G  GDVA               D  RYLIGDDEH WSD G+ N EGGCYAKCIDLSREKEP I++AI+FG VLEN+V D  TR VDY D S+TENTRAAYP+EYI
Sbjct:  116 DPRYRLNVQVVCEYAWQALFTRQLFRRPSREELDAF-EPDWTVISVPGLLTDPEEDGTESETFVGIDFGRRVVLICGTRYAGEIKKSIFSVLNFVLPTEHGVFPMHCSANVGPGGDVALFFGLSGTGKTTLSSDPERYLIGDDEHGWSDEGIFNFEGGCYAKCIDLSREKEPQIYDAIRFGAVLENVVVDRITRRVDYSDASLTENTRAAYPLEYI 330          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA1_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.984e-52
Identity = 102/215 (47.44%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +R+ +RIV+  A+ +LF+H + IRPT+EEL     P FT+  A  F          S   I +N  R+ ++I GT YAGEMKK +F++M+YL+P++ +  +H   NMG  GD A               D  RYLIGDDEH WSD G+ N EGGCYAKCI LS E EP IWNAI+FG+VLEN++ D   R +DY   ++TENTRAAYP+++I
Sbjct:  112 DPAYRMPIRIVNEYAWQNLFVHQLFIRPTAEELAGH-EPRFTVICAPGFKAIPEEDGTRSEAFIILNFDRRLVIIGGTSYAGEMKKSIFTVMNYLLPEQGVCPMHCSANMGPAGDTALFFGLSGTGKTTLSADPERYLIGDDEHGWSDKGIFNFEGGCYAKCIKLSAEHEPQIWNAIRFGSVLENVMVDPDCRIIDYDSDALTENTRAAYPVDFI 325          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEON (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella oneidensis GN=pckA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.501e-52
Identity = 102/215 (47.44%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DPEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRQNKPVWQIINAPDFVCMPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAES (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.110e-51
Identity = 104/215 (48.37%), Postives = 141/215 (65.58%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D E R+K+++++  A+H+LF  NM IRP S +      P+FTI +A  F  N       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D  R LIGDDEH W+ NGV NIEGGCYAK I LS++KEP I+NAIK+GT+LEN V ++    +D+ D + TENTRAAYPI+YI
Sbjct:  116 DKESRLKLKVINELAWHNLFARNMFIRPESIDEAQNIKPNFTIVSAPHFKANPKLDGTHSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPKRKLIGDDEHGWNKNGVFNIEGGCYAKAIHLSKQKEPQIYNAIKYGTILENTVTND-DGTIDFDDNTYTENTRAAYPIDYI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus pumilus (strain SAFR-032) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.110e-51
Identity = 104/215 (48.37%), Postives = 138/215 (64.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ + +V+  A+H+LF   + IRP          P FTI +A  F  +  T    S T I ++  ++ ++I GT+YAGEMKK +FS+M+YL+P++ ILS+H   N+G++GDVA                 +R LIGDDEH WS +GV NIEGGCYAKC++LS EKEP I+ AI FG+VLEN+V DE TRE DY D   TENTRAAYPIE I
Sbjct:  114 DERYRMPITVVNEFAWHNLFAKQLFIRPDGSTPSSNEKP-FTILSAPHFKADPETDGTNSETFIIVSFEKRTILIGGTEYAGEMKKSIFSVMNYLLPEQDILSMHCSANVGQEGDVALFFGLSGTGKTTLSASASRKLIGDDEHGWSGSGVFNIEGGCYAKCVNLSEEKEPQIYKAISFGSVLENVVLDEETREADYDDTFFTENTRAAYPIEMI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAEQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.450e-51
Identity = 105/215 (48.84%), Postives = 141/215 (65.58%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D E R+K+++++  A+H+LF  NM IRP S +      P+FTI +A  F  N       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D  R LIGDDEH W+ NGV NIEGGCYAK I LS++KEP I+NAIK+GT+LEN V ++    VD+ D + TENTRAAYPI+YI
Sbjct:  116 DKESRLKLKVINELAWHNLFARNMFIRPESIDEAQNIKPNFTIVSAPHFKANPKLDGTHSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPIQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPKRKLIGDDEHGWNKNGVFNIEGGCYAKAIHLSKQKEPQIYNAIKYGTILENTVTND-DGTVDFDDNTYTENTRAAYPIDYI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHESR (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain MR-7) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.450e-51
Identity = 102/215 (47.44%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DPEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRQDKPVWEIINAPDFVCVPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHESM (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain MR-4) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.450e-51
Identity = 102/215 (47.44%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DPEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRQDKPVWQIINAPDFVCVPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACA22.922e-5248.37Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_STACT4.984e-5246.98Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_RUBXD4.984e-5247.22Phosphoenolpyruvate carboxykinase [ATP] OS=Rubroba... [more]
PCKA1_MOOTA4.984e-5247.44Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moore... [more]
PCKA_SHEON8.501e-5247.44Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_STAES1.110e-5148.37Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BACP21.110e-5148.37Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_STAEQ1.450e-5148.84Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_SHESR1.450e-5147.44Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHESM1.450e-5147.44Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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