FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHESA (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain ANA-3) GN=pckA PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.450e-51
Identity = 102/215 (47.44%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DPEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRQDKPVWQIINAPDFVCVPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA2_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.473e-51
Identity = 98/215 (45.58%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +R+ +R+V+  A+ +LF+H + +RP++ ELE    P FT+  A  F          S   + +N  R+ ++I GT YAGEMKK +F++M+YL+P+R +  +H   NMG  GD A               D  R LIGDDEH WSD+G+ N EGGCYAKCI LS E EP IWNAI+FG+VLEN+  D  +R +DY   ++TENTRAAYP+++I
Sbjct:  112 DPAYRMPIRVVNQYAWQNLFVHQLFVRPSAAELEAH-EPQFTVICAPGFQATPEVDGTRSEAFVVLNFDRRLIIIGGTSYAGEMKKSIFTVMNYLLPERGVCPMHCSANMGPAGDTALFFGLSGTGKTTLSADPERRLIGDDEHGWSDHGIFNFEGGCYAKCIKLSAEHEPQIWNAIRFGSVLENVAVDPDSRAIDYDCDALTENTRAAYPVDFI 325          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pckA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DTEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRKNKPVWQIINAPDFVCDPARDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHESW (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain W3-18-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DTEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPARDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=pckA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DTEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPARDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS195) GN=pckA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DTEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPERDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS185) GN=pckA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DEH R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DTEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPARDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pckA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51
Identity = 102/215 (47.44%), Postives = 142/215 (66.05%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D + ++K+ +V+  A+H+LF  NM IRP++ E      P+FTI +A  F  +       S T I  +   K ++I GT+YAGEMKKG+FS+++YL+PK  I+S+H   N+G+ GDVA               D  R LIGDDEH W++NG+ NIEGGCYAK I+LS++KEP I++AIK+GT+LEN+V DE   +VD+ D   TENTRAAYPI +I
Sbjct:  116 DEDSQLKLTVVNELAWHNLFAQNMFIRPSTNEEAQEIKPNFTIISAPHFKADPSIDGTNSETFIITSFKHKVILIGGTEYAGEMKKGIFSVINYLLPKDDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPTRKLIGDDEHGWNNNGIFNIEGGCYAKAINLSQKKEPQIYDAIKYGTILENVVVDEE-GDVDFDDNQYTENTRAAYPIHHI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS223) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 100/215 (46.51%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH   VR+ +  A+H LF  N+ I P  EE      P + I NA  F C+       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V D+H R  +Y D S+TENTRAAYP+E+I
Sbjct:  102 DTEHYQPVRVTTQYAWHQLFARNLFIIP--EEFNRKDKPVWQIINAPDFVCDPARDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDKH-RVPNYKDSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEAM (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 99/215 (46.05%), Postives = 134/215 (62.33%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH + V + +  A+H LF  N+ I P  E     G P + I NA  F C        S  ++ IN A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W+   V NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V D+  R  DY + S+TENTRAAYP+E+I
Sbjct:  102 DPEHYLPVTVTTEYAWHQLFARNLFIIP--EHFNQAGKPTWQIMNAPGFVCEPERDGTASEATVIINFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGSVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVLDD-KRVPDYKNASLTENTRAAYPLEHI 313          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_SHESA1.450e-5147.44Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA2_MOOTA2.473e-5145.58Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moore... [more]
PCKA_SHEB53.230e-5146.98Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHESW4.219e-5146.98Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEPC4.219e-5146.98Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEB94.219e-5146.98Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEB84.219e-5146.98Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_STAS15.510e-5147.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_SHEB21.227e-5046.51Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEAM1.603e-5046.05Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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