FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_DEIGD (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus geothermalis (strain DSM 11300) GN=pckA PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 104/216 (48.15%), Postives = 140/216 (64.81%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP++RI VR+++  AYHSLF+ NM +RPT+EELE F  PD+T+ N   F  +     + S T I +N  RK +++ GTQYAGE KKG+F +++YL+P+R ++ +H   NMG+DGDVA               D +R LIGDDEH W+D GV N EGGCYAK I L+ E EP I+   + +GTVLEN+V  +     D  D S+TENTR+AYPI  I
Sbjct:  112 DPQYRIAVRVITEMAYHSLFVRNMFVRPTAEELEHF-QPDWTVLNIPSFKADPERDGVRSETFILVNFTRKMILVGGTQYAGENKKGIFGVLNYLLPQRGVMPMHCSANMGEDGDVALFFGLSGTGKTTLSADPSRRLIGDDEHGWTDTGVFNFEGGCYAKVIHLNPEAEPAIYRTTQTYGTVLENVVL-KPDGTPDLNDGSLTENTRSAYPITQI 325          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAHJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pckA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 102/215 (47.44%), Postives = 140/215 (65.12%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D + ++K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G  GDVA                 +R LIGDDEH W+ NG+ NIEGGCYAK I+LS+EKEP I+NAI++GT+LEN V +E    VD+ D S TENTRAAYPI +I
Sbjct:  116 DKDTQLKLTVINELAWHNLFAQNMFIRPDSKEEASNIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKTILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGDKGDVALFFGLSGTGKTTLSAAPDRKLIGDDEHGWNKNGIFNIEGGCYAKAINLSKEKEPQIYNAIQYGTILENTVVNER-GVVDFDDNSYTENTRAAYPIHHI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_HAHCH (Phosphoenolpyruvate carboxykinase [ATP] OS=Hahella chejuensis (strain KCTC 2396) GN=pckA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 90/215 (41.86%), Postives = 134/215 (62.33%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH + +++ +  A+H+LF  N+ IRP  E        ++ + N   F C        S  ++ IN AR+++++ G +YAGEMKK +FS+ ++L+P++ +L +H   N+G+DG                  D +R+LIGDDEH W    V N+EGGCYAKCIDLS++ EP IWNAI+FG ++EN+V D+  R  DY D S+TENTR AYP+E++
Sbjct:   98 DPEHYLPIKVTTETAWHNLFGRNLFIRP--ERYNPADKQEWQVMNIPDFVCEPERDGTNSDGAVIINFARRKVLLAGMRYAGEMKKAMFSVQNFLLPEKDVLPMHCSANVGEDGQTCLFFGLSGTGKTTLSADESRFLIGDDEHGWGRGTVFNVEGGCYAKCIDLSQKNEPVIWNAIRFGAIVENVVIDDQDRTPDYTDVSLTENTRCAYPLEHV 310          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_DEIRA (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus radiodurans GN=pckA PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 6.092e-50
Identity = 104/217 (47.93%), Postives = 142/217 (65.44%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEH-TREVDYLDKSVTENTRAAYPIEYI 646
            D EHRI VR+++  AYHSLF+ NM +RPT+EEL++F   ++T+ N   F  +       + T I +N ++K ++  GTQYAGE KKG+F +++YL+P + I+ +H   N+G+DGDVA               D  R LIGDDEH W+D GV N EGGCYAK I+LS E EP I+   + +GTVLEN+V DE  T ++D  D S+TENTR+AYPIE I
Sbjct:  118 DAEHRIPVRMITEMAYHSLFIRNMFVRPTAEELQNFQA-EWTVLNIPSFKADPAVDGTRTDTFILVNFSKKMIIAGGTQYAGENKKGIFGVLNYLLPAKGIMPMHCSANVGEDGDVALFFGLSGTGKTTLSADPGRKLIGDDEHGWTDTGVFNFEGGCYAKVINLSAEAEPAIYQTTRNYGTVLENVVLDESGTPDLD--DGSLTENTRSAYPIEQI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_LEPIN (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira interrogans GN=pckA PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 104/216 (48.15%), Postives = 137/216 (63.43%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNA-GQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +PE R+ +R+VS +A+   F  NM +RPT EEL     P+FTI NA G    N   H M S   +  +LA+K  +I GT+Y GEMKKG+FS+M+Y +P + ILS+H   N+G+DGD A               D NR LIGDDEH W DNG+ NIEGGCYAK I+L  + EPDI+ AI+   +LEN+V+D  T+ VDY   + TENTR +YPI +I
Sbjct:  114 NPETRVSLRVVSEKAWQHHFCTNMFLRPTKEELVGLD-PEFTIINACGIKNENFKQHGMNSEVFVIFHLAKKICIIGGTEYGGEMKKGIFSVMNYKLPLQGILSMHCSANVGQDGDTALFFGLSGTGKTTLSTDPNRKLIGDDEHGWDDNGIFNIEGGCYAKVINLDPKTEPDIYEAIRKDALLENVVYDPQTKIVDYSSAAKTENTRVSYPIFHI 328          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_LEPIC (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=pckA PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 104/216 (48.15%), Postives = 137/216 (63.43%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNA-GQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +PE R+ +R+VS +A+   F  NM +RPT EEL     P+FTI NA G    N   H M S   +  +LA+K  +I GT+Y GEMKKG+FS+M+Y +P + ILS+H   N+G+DGD A               D NR LIGDDEH W DNG+ NIEGGCYAK I+L  + EPDI+ AI+   +LEN+V+D  T+ VDY   + TENTR +YPI +I
Sbjct:  114 NPETRVSLRVVSEKAWQHHFCTNMFLRPTKEELVGLD-PEFTIINACGIKNENFKQHGMNSEVFVIFHLAKKICIIGGTEYGGEMKKGIFSVMNYKLPLQGILSMHCSANVGQDGDTALFFGLSGTGKTTLSTDPNRKLIGDDEHGWDDNGIFNIEGGCYAKVINLDPKTEPDIYEAIRKDALLENVVYDPQTKIVDYSSAAKTENTRVSYPIFHI 328          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACLD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pckA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.315e-49
Identity = 99/215 (46.05%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D ++R+ + +V+  A+H+LF   + IRP   + +    P FTI +A  F  +       S T I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ IL +H   N+G++G  A               D  R LIGDDEH WS  GV NIEGGCYAKCI+LS EKEP I+NAI+FG+VLEN+V D  T E DY D   TENTRAAYPI+ I
Sbjct:  114 DEKYRLPITVVNEFAWHNLFARQLFIRPEEHDKKPEEQP-FTILSAPHFKADPLVDGTRSETFIIVSFEKRTILIGGTEYAGEMKKSIFSIMNFLLPEQNILPMHCSANIGEEGGTALFFGLSGTGKTTLSADPKRKLIGDDEHGWSSTGVFNIEGGCYAKCINLSEEKEPQIYNAIRFGSVLENVVVDSKTGEPDYSDSFYTENTRAAYPIDAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAW (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MW2) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAU (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_DEIGD2.094e-5048.15Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_STAHJ4.664e-5047.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_HAHCH4.664e-5041.86Phosphoenolpyruvate carboxykinase [ATP] OS=Hahella... [more]
PCKA_DEIRA6.092e-5047.93Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_LEPIN1.357e-4948.15Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_LEPIC1.357e-4948.15Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_BACLD2.315e-4946.05Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_STAAW3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAU3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAT3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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