FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.960e-48
Identity = 100/215 (46.51%), Postives = 134/215 (62.33%), Query Frame = 2
Query:    5 PEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            PEHRI VRI++ RA+H+LF  NM +R T EEL    T +FT+ +   F          S   I IN ARK ++I GT YAGE+KK +F++++YL+P++ ++S+H   N G+ G+VA                 NR LIGDDEH W D GV N EGGCYAK I+LS + EP+I+    KFGT+LEN+  D  +R +D  D S TENTRA+YPI +I
Sbjct:  118 PEHRIPVRIITERAWHALFARNMFLRATQEELLTHNT-EFTVIDLPAFHAQPKVDGTNSEAFIIINFARKLVIIGGTSYAGEIKKSIFTVLNYLLPQKGVMSMHCSANAGEKGEVAIFFGLSGTGKTTLSAAPNRLLIGDDEHGWDDAGVFNFEGGCYAKVINLSPQSEPEIYQCTRKFGTILENVAIDTISRRIDLDDASFTENTRASYPITHI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.559e-48
Identity = 96/215 (44.65%), Postives = 135/215 (62.79%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH + VR+ +  A+H LF  N+ I P      D G   + I NA  F C+       S   + +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G+DGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN++ DE+ R  +Y D S+TEN+RAAYP+E+I
Sbjct:  102 DDEHYLPVRVTTEYAWHQLFARNLFITPEHFNRGDKGV--WQIINAPGFVCDPSRDGTHSDAVVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGQDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAKGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVMLDEN-RVPNYKDSSLTENSRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 98/213 (46.01%), Postives = 133/213 (62.44%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            EH   V++ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ IN A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G DGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DE+ R  DY + S+TENTRAAYP+E+I
Sbjct:  104 EHYQPVKVTTQYAWHQLFARNLFIVP--EEFNAADKPVWQIINAPGFECVPERDGTHSDATVIINFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGADGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVTDEN-RVPDYTNSSLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEU2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 95/215 (44.19%), Postives = 132/215 (61.40%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP H + V++ +  A+H+LF   + I P  E+    G  ++ I NA  F C+       S  ++ IN A ++++I G +YAGEMKK +FS+ ++L+P   +L +H   NMG++GDV                D +RYLIGDDEH W +  V NIEGGCYAKCIDLS + EP IW AI+ G VLEN+V D  T++ DY D S+T+N+RAAYP E I
Sbjct:  102 DPAHYLPVKMTTETAWHNLFGRCLFINP--EQYNPAGKDEWEIQNAPWFVCDPERDGTNSDGTVIINFAARKVLIAGMRYAGEMKKAMFSVQNFLLPASDVLPMHCAANMGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNIEGGCYAKCIDLSEKNEPVIWKAIQHGAVLENVVLDPVTKKADYADSSLTQNSRAAYPRELI 314          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSE14 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 95/215 (44.19%), Postives = 132/215 (61.40%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP H + V++ +  A+H+LF   + I P  E+    G  ++ I NA  F C+       S  ++ IN A ++++I G +YAGEMKK +FS+ ++L+P   +L +H   NMG++GDV                D +RYLIGDDEH W +  V NIEGGCYAKCIDLS + EP IW AI+ G VLEN+V D  T++ DY D S+T+N+RAAYP E I
Sbjct:  102 DPAHYLPVKMTTETAWHNLFGRCLFINP--EQYNPAGKDEWEIQNAPWFVCDPERDGTNSDGTVIINFAARKVLIAGMRYAGEMKKAMFSVQNFLLPASDVLPMHCAANMGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNIEGGCYAKCIDLSEKNEPVIWKAIQHGAVLENVVLDPVTKKADYADSSLTQNSRAAYPRELI 314          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_AZOC5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 97/216 (44.91%), Postives = 135/216 (62.50%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP HRI  R+ +  A+HSLF+  M  RP  EEL  +  P+ TI +   F  +   H + S T I +N  R+ ++I  + YAGEMKK +F+ ++YL+P + ++ +H   N GKDGDVA               D  R L+GDDEH WS+ GV N EGGCYAK I LS+E EP+I+ A  +FGT+LEN++  E TR  D+ D S+TENTR+AYP+++I
Sbjct:  117 DPAHRIAARVYTEYAWHSLFIRTMLRRPAREELPGY-VPELTIIDLPSFKADPARHGVRSDTIIAVNFTRRIVLIGSSSYAGEMKKSVFTFLNYLLPAKGVMPMHCSANAGKDGDVALFFGLSGTGKTTLSADPARTLLGDDEHGWSNTGVFNFEGGCYAKTIRLSKEAEPEIFAASDRFGTILENVILHEDTRVPDFDDGSLTENTRSAYPLDFI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEWM (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 95/215 (44.19%), Postives = 134/215 (62.33%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  H   +++ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+GK+GD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IWNAI+FGTVLEN+V DE+ R  DY + ++TEN+RAAYP+E+I
Sbjct:  102 DDAHYQPIQVTTETAWHQLFARNLFIVP--EEFNSADKPVWQIINAPGFECVPERDGTHSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGKEGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWNAIRFGTVLENVVMDEN-RIPDYTNSTLTENSRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEHH (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella halifaxensis (strain HAW-EB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 97/213 (45.54%), Postives = 133/213 (62.44%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            EH   V++ +  A+H LF  N+ I P  EE      P + I NA  F C        S  ++ IN A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G DGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DE+ R  DY + ++TENTRAAYP+E+I
Sbjct:  104 EHYQPVKVTTQYAWHQLFARNLFIVP--EEFNAADKPVWQIMNAPDFECVPERDGTHSDATVIINFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGNDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVTDEN-RVPDYSNSTLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_EUBE2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=pckA PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.366e-48
Identity = 99/213 (46.48%), Postives = 133/213 (62.44%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGD-VAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+ VR +   A+ + F+ NM I+PT+EELE+F  PDF +YNA +     Y    + S T +  N+   E VI+ T Y GEMKKG+FS+M+Y +P + I S+H   N  K+G+  A               D  R LIGDDEH W DNGV N EGGCYAK I+L ++ EPDI+NAIK   +LEN+  DE+ + +D+ DKSVTENTR +YPI +I
Sbjct:  125 RMAVRFIVEVAWQAHFVTNMFIKPTAEELENF-EPDFVVYNASKAKVENYAELGLNSETCVAFNITSHEQVIINTWYGGEMKKGMFSMMNYYLPLKGIASMHCSANTDKNGENTAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDNGVFNFEGGCYAKVINLDKDSEPDIYNAIKRNALLENVTLDENGK-IDFADKSVTENTRVSYPINHI 335          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BRASO (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp. (strain ORS278) GN=pckA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 99/216 (45.83%), Postives = 134/216 (62.04%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  RIK R+ +  A+HSLF+  + IRP + EL+ F  P+ TI +   F  +   H + S   + I+ ARK ++I G+ YAGEMKK +F+ ++Y +P R ++ +H   N+G  GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS+E EP I+ A  +FG VLEN+V DE +R  D+ D S TENTR+AYP++YI
Sbjct:  116 DPTFRIKTRVFTELAWHSLFIRTLLIRPETIELDTF-VPELTIIDMPSFRADPMRHGVRSQNVVAIDFARKIVLIGGSYYAGEMKKSVFTTLNYYLPARGVMPMHCSANVGPKGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGPSGVFNFEGGCYAKCIKLSQEAEPQIFAASNRFGAVLENVVLDEDSRVPDFDDGSKTENTRSAYPLDYI 330          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_GEOSM1.960e-4846.51Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_SHEDO2.559e-4844.65Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEPA3.343e-4846.01Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_PSEU23.343e-4844.19Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PSE143.343e-4844.19Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_AZOC53.343e-4844.91Phosphoenolpyruvate carboxykinase [ATP] OS=Azorhiz... [more]
PCKA_SHEWM4.366e-4844.19Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEHH4.366e-4845.54Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_EUBE24.366e-4846.48Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA_BRASO5.702e-4845.83Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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