FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CUPTR (30S ribosomal protein S16 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQ-DSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PF+ ++A DSRS RDG+ +E +G+YNPL + + G R+ DR+ YW VGAQ S V R++ Sbjct: 1 MVVIRLARGGSKKRPFFNIVATDSRSRRDGRFIERVGFYNPLAAEGEEGLRLAQ--DRLAYWQGVGAQLSPTVARLV 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BUCAP (30S ribosomal protein S16 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 33/76 (43.42%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +VRIRLA +G K +PFY+++ ADSR RDG+ +E LG++NP+ + + LN +R++YW GAQ S Q+++ Sbjct: 1 MVRIRLALYGTKKRPFYKMVVADSRFSRDGRFIEKLGHFNPV-SKCQNSTLKLNLNRIEYWQGKGAQISKRSQKLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BIFLO (30S ribosomal protein S16 OS=Bifidobacterium longum GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M +IRL R G K FYRV+ DSR RDGK +E +G YNP + + DR +YWL VGAQPS+PV ++L Sbjct: 1 MATKIRLKRQGKKFYAFYRVVVVDSRKKRDGKVIEEIGTYNP---NTQPSTIQIKSDRAQYWLGVGAQPSEPVFKLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BIFLD (30S ribosomal protein S16 OS=Bifidobacterium longum (strain DJO10A) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M +IRL R G K FYRV+ DSR RDGK +E +G YNP + + DR +YWL VGAQPS+PV ++L Sbjct: 1 MATKIRLKRQGKKFYAFYRVVVVDSRKKRDGKVIEEIGTYNP---NTQPSTIQIKSDRAQYWLGVGAQPSEPVFKLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_AZOSB (30S ribosomal protein S16 OS=Azoarcus sp. (strain BH72) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGL--NFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PF+ ++AADSR+ RDG+ +E +GYYNP+ SG GL N +R+ YW GAQ S V R++ +A Sbjct: 1 MVVIRLARGGAKKRPFFNIVAADSRNRRDGRFIERVGYYNPVA---SGAEKGLVVNTERLAYWEQNGAQLSPTVARLVKQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_XANC5 (30S ribosomal protein S16 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRI 658 +V+IRL R G K +PFY ++ D RS RDG+++E LGYYNP+ Q + R+ L+ RV +W+ GAQ +D V+ + Sbjct: 1 MVKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERLGYYNPV-AQGAEPRIVLDVARVDHWVGNGAQLTDKVRNL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_XANAC (30S ribosomal protein S16 OS=Xanthomonas axonopodis pv. citri GN=rpsP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRI 658 +V+IRL R G K +PFY ++ D RS RDG+++E LGYYNP+ Q + R+ L+ RV +W+ GAQ +D V+ + Sbjct: 1 MVKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERLGYYNPV-AQGAEPRIVLDVARVDHWVGNGAQLTDKVRNL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_WOLSU (30S ribosomal protein S16 OS=Wolinella succinogenes GN=rpsP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M IRL R G K KPFYR++ DSR RDG +E +GYYNPL K + +R+KYW+SVGA+ SD V Sbjct: 1 MATVIRLTRLGRKKKPFYRMVVTDSRKRRDGGWVEAIGYYNPLAETPVVK---FDAERLKYWVSVGAKMSDRV 70
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_UNCTG (30S ribosomal protein S16 OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=rpsP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 32/77 (41.56%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M VR+RL R G +P+YRV+A D R+ RDG+ +E+LG Y+P+ + K +N +R+ YWL +GA+ S+ V ++ Sbjct: 1 MAVRLRLQRRGKPKRPYYRVVAIDQRAKRDGEPIEILGQYDPIAEDNKFK---VNIERINYWLGIGAKASETVAALI 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRLI (30S ribosomal protein S16 OS=Streptomyces lividans GN=rpsP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAG 673 M V+I+L R G P YR++ ADSR+ RDG+ +E +G Y+P M ++ +RV YWL VGAQP++PV IL + G Sbjct: 1 MAVKIKLKRLGKIRSPHYRIVVADSRTRRDGRAIEEIGKYHPTYNPSV---MEVDAERVAYWLGVGAQPTEPVLAILKKTG 78 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |