FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRP4 (30S ribosomal protein S16 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DRV WL+ GAQPSD V+ IL + G+L Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLTWLANGAQPSDTVRNILSKEGVL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRP2 (30S ribosomal protein S16 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DRV WL+ GAQPSD V+ IL + G+L Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLAWLANGAQPSDTVRNILSKEGVL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICTY (30S ribosomal protein S16 OS=Rickettsia typhi GN=rpsP PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 40/82 (48.78%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ D+ +R+ L DR++YWLS GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVIANATAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIEYWLSTGAKPTERVAKFIEKAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHOPB (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V IRLAR G K +P Y V+ ADSR PRDG+ +E LG++NPL +DS R+ L+ D+VK W++ GAQPSD V R L AG+ Sbjct: 1 MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDSEARLKLDLDKVKAWVAKGAQPSDRVARFLDAAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHOCS (30S ribosomal protein S16 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 M V+IRL+R G K +PFY ++ A+SR+PRDG +E +G YNP+ D +R+ L DR+K WL+ GAQP+D V R L +A L+P Sbjct: 1 MSVKIRLSRGGAKKRPFYSIVVANSRAPRDGDFIEKVGTYNPMVPHDHPERVVLQEDRIKEWLAKGAQPTDRVARFLGKANLIP 84
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_DICTD (30S ribosomal protein S16 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 +V+IRL R G KNKP YR++A DSR PRDGKHLE+LG+Y+P + + L +R+ YWLS GAQP+D V IL R G+ Sbjct: 1 MVKIRLTRVGAKNKPAYRIVAMDSREPRDGKHLEILGFYDP---KTDPATIQLKEERILYWLSQGAQPTDTVLSILKRYGV 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_WOLWR (30S ribosomal protein S16 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M V+IRLARFG K +PFYR++ ADSR+PRDG+ +E +G Y+P+ +D+ R+ + DR+K+WLSVGAQ ++ V Sbjct: 1 MAVKIRLARFGAKKRPFYRIVVADSRAPRDGRFIEKIGQYDPMLPKDNKNRVVVKADRLKHWLSVGAQATERV 73
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_WOLPM (30S ribosomal protein S16 OS=Wolbachia pipientis wMel GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M V+IRLARFG K +PFYR++ ADSR+PRDG+ +E +G Y+P+ +D+ R+ + DR+K+WLSVGAQ ++ V Sbjct: 1 MAVKIRLARFGAKKRPFYRIVVADSRAPRDGRFIEKIGQYDPMLPKDNKNRVVVKADRLKHWLSVGAQATERV 73
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHOP5 (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain BisA53) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V IRLAR G K +P Y V+ ADSR PRDG+ +E LG++NPL +D+ R+ L+ D+VK W++ GAQPSD V R L AG++ Sbjct: 1 MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNEARLKLDLDKVKAWVAKGAQPSDRVARFLDAAGVM 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CALS8 (30S ribosomal protein S16 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M VRIRL R G KN PFYR++ ADSRSPRDGK ++ +GYYNPL K ++ ++ K WLS GAQP+D V+ +L + G++ Sbjct: 1 MAVRIRLKRMGAKNNPFYRIVVADSRSPRDGKTIDEIGYYNPLKNPADIK---VDVEKAKKWLSNGAQPTDTVKILLKKVGVI 80 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |