FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_GLUDA (30S ribosomal protein S16 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 M ++IRLAR G K +P+Y ++ ADSRSPRDG+ +E +G YNP+ D R+ L +R+ +WLS GA P+D V R L AGL P Sbjct: 1 MSLKIRLARAGAKKRPYYHIVIADSRSPRDGRFIEKVGAYNPMLPSDHADRVRLVNERITHWLSQGALPTDRVARFLGNAGLAP 84
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_DICT6 (30S ribosomal protein S16 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 +V+IRL R G KNKP YR++A DSR PRDGKHLE+LG+Y+P + + L +R+ YWLS GAQP+D V IL + G+ Sbjct: 1 MVKIRLTRVGAKNKPAYRIVAMDSREPRDGKHLEILGFYDP---KTDPATIQLKEERILYWLSQGAQPTDTVLSILKKYGV 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RT16_PONAB (28S ribosomal protein S16, mitochondrial OS=Pongo abelii GN=MRPS16 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 443 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP K + LN DR+++W+ GA S P++++L AG P Sbjct: 19 IRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFP 98
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RT16_HUMAN (28S ribosomal protein S16, mitochondrial OS=Homo sapiens GN=MRPS16 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 443 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP K + LN DR+++W+ GA S P++++L AG P Sbjct: 19 IRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFP 98
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRS7 (30S ribosomal protein S16 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ L DRV WL GAQPSD V+ +L +AG++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLDWLGKGAQPSDTVRSLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRGC (30S ribosomal protein S16 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KP+YR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DRV WL GAQPSD V+ IL + G+L Sbjct: 1 MAVKIRLTRMGSKKKPYYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLAWLENGAQPSDTVRNILSKEGVL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRE4 (30S ribosomal protein S16 OS=Streptococcus equi subsp. equi (strain 4047) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ L DRV WL GAQPSD V+ +L +AG++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLDWLGKGAQPSDTVRSLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRA5 (30S ribosomal protein S16 OS=Streptococcus agalactiae serotype V GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ + +RV WLS GAQPSD V+ +L +AG++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRA3 (30S ribosomal protein S16 OS=Streptococcus agalactiae serotype III GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ + +RV WLS GAQPSD V+ +L +AG++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRA1 (30S ribosomal protein S16 OS=Streptococcus agalactiae serotype Ia GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ + +RV WLS GAQPSD V+ +L +AG++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVM 80 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |