FC931768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_HAEDU (Fumarate hydratase class II OS=Haemophilus ducreyi GN=fumC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 4.380e-33 Identity = 83/159 (52.20%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS NF IG E MP I+ AF LKK AA N E G L I E+ KL D FPLV+WQTGSGTQSNMN NEVIANRA + G GEK I+HPND VN+SQSSNDT+PT MHIAA + IP ++ L + KS F+ VK+ Sbjct: 27 RSRNNFRIGPEAS-MPVEIIEAFAYLKKAAAFANAELGALTTEKRDLIAMVCDEILANKLADEFPLVIWQTGSGTQSNMNLNEVIANRAHVLQGGALGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEVTIPAIERLQKTFAIKSEAFKDVVKI 184
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_STRAW (Fumarate hydratase class II OS=Streptomyces avermitilis GN=fumC PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 7.470e-33 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G+R + + A +K AAKVN E G LD + +AI +AA EVAEG+ ++HFP+ V+QTGSGT SNMNANEVIA A E LG + VHPNDHVN SQSSND FP+ +HIAA L+P L+ L +L KS EF VK Sbjct: 34 RAVENFPISGQR--LERAHIEALARIKGAAAKVNAELGVLDKDVAEAIQEAAAEVAEGRWDEHFPVDVFQTGSGTSSNMNANEVIATLATERLG-----RDVHPNDHVNASQSSNDVFPSSIHIAATAAVTRDLVPALEHLAAALGRKSEEFADVVK 183
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_STAES (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fumC PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.708e-32 Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS +NF +G +E MP ++ F LK+ AA N E G L AI+ A + G+L++HFPLV+WQTGSGTQSNMN NEV++ A E L ++ +HPND VN+SQSSNDTFPT MH+A E ++L P L L + K ++Q +K+ Sbjct: 27 RSKRNFPVG--KEHMPIQVIYGFAQLKRGAALANHELGKLSDEKKNAIVYACDRILNGELDNHFPLVIWQTGSGTQSNMNVNEVVSYVANEYLKKHGSKETIHPNDDVNKSQSSNDTFPTAMHVALFHEVETKLEPALNHLRQTFKEKEDQYQSIIKI 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_STAEQ (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fumC PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.708e-32 Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS +NF +G +E MP ++ F LK+ AA N E G L AI+ A + G+L++HFPLV+WQTGSGTQSNMN NEV++ A E L ++ +HPND VN+SQSSNDTFPT MH+A E ++L P L L + K ++Q +K+ Sbjct: 27 RSKRNFPVG--KEHMPIQVIYGFAQLKRGAALANHELGKLSDEKKNAIVYACDRILNGELDNHFPLVIWQTGSGTQSNMNVNEVVSYVANEYLKKHGSKETIHPNDDVNKSQSSNDTFPTAMHVALFHEVETKLEPALNHLRQTFKEKEDQYQSIIKI 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_STRCO (Fumarate hydratase class II OS=Streptomyces coelicolor GN=fumC PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.842e-32 Identity = 79/157 (50.32%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF + G+R + + A +K AAKVN E G LD + AI +AA EVAEGK ++HFP+ V+QTGSGT SNMN NEV+A A E LG + VHPNDHVN SQSSND FP+ +HIAA LIP L L +L K+ EF VK Sbjct: 28 RAVENFPVSGQR--IERAHIEALARIKSAAAKVNAELGVLDEDVAGAIQEAAGEVAEGKWDEHFPVDVFQTGSGTSSNMNTNEVVATLATERLG-----RDVHPNDHVNASQSSNDVFPSSIHIAATAAVTRDLIPALDHLAGALERKAGEFADVVK 177
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_LISIN (Fumarate hydratase class II OS=Listeria innocua GN=fumC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.324e-32 Identity = 80/158 (50.63%), Postives = 101/158 (63.92%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVN-MEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS +NF IG MP+ I+ AF LKK AAKVN +E L A AI ++ +G+L++HFPLVVWQTGSGTQSNMN NEVIA+ A L GE+ VHPND VN SQSSNDTFPT MHIAA ++L+ + + L +K ++ VK+ Sbjct: 26 RSRRNFAIGDNY--MPKEIIYAFAQLKKAAAKVNALEGKLSEAKSVAIGNVCDQIIQGELDEHFPLVVWQTGSGTQSNMNVNEVIAHVANLTL----GEEKVHPNDDVNMSQSSNDTFPTAMHIAAYQALVTKLLSEITKMEEVLTTKKNQYMQLVKI 177
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_STAS1 (Fumarate hydratase class II OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=fumC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.079e-31 Identity = 74/158 (46.84%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS +NF +G +ERMP +V F LK+ AA N G L A AI+ A V +L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A E ++L P LK L ++ K ++ +K+ Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRGAALANHALGKLSDAKKDAIVYACDRVLNKELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANTYLKEQGIDESIHPNDDVNKSQSSNDTFPTAMHVALYNEVETKLEPALKTLRDTFKQKEEQYHDIIKI 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_LISMF (Fumarate hydratase class II OS=Listeria monocytogenes serotype 4b (strain F2365) GN=fumC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.193e-30 Identity = 79/158 (50.00%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS +NF IG MP I+ AF LKK AKVN G L AI Q ++ +G+L++HFPLVVWQTGSGTQSNMN NEVIA+ A L GE +HPND VN SQSSNDTFPT MHIAA ++L+P + + L K ++ VK+ Sbjct: 26 RSKRNFAIGDNP--MPIEIIYAFAQLKKATAKVNAAEGKLSEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNMNVNEVIAHVANLTL----GEGQIHPNDDVNMSQSSNDTFPTAMHIAAYGALVTKLLPEITKMEAVLAEKKSKYMHLVKI 177
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_LISMO (Fumarate hydratase class II OS=Listeria monocytogenes GN=fumC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.657e-30 Identity = 79/158 (50.00%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS +NF IG MP I+ AF LKK AKVN G L AI Q ++ +G+L++HFPLVVWQTGSGTQSNMN NEVIA+ A L GE +HPND VN SQSSNDTFPT MHIAA ++L+P + + L K ++ VK+ Sbjct: 26 RSKRNFAIGDNP--MPIEIIYAFAQLKKATAKVNAAEGKLAEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNMNVNEVIAHVANLTL----GEGQIHPNDDVNMSQSSNDTFPTAMHIAAYGALVTKLLPEITKMEAVLTEKKNKYMHLVKI 177
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_MYCTU (Fumarate hydratase class II OS=Mycobacterium tuberculosis GN=fumC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.470e-30 Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G + +RA G+LK A+VN + GL P AI+ AA E+A+G+ +D FP+ V+QTGSGT SNMN NEVIA+ AA +G +HPND VN SQSSNDTFPT HIAA + LIP L+ LH++L +K++++ VK Sbjct: 34 RAVENFPISGRGLERTQ--IRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAA------KGGVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVK 182 The following BLAST results are available for this feature:
BLAST of FC931768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931768 ID=FC931768; Name=FC931768; organism=Citrus clementina; type=EST; length=473bpback to top |