FC931768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_MYCBO (Fumarate hydratase class II OS=Mycobacterium bovis GN=fumC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.470e-30 Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G + +RA G+LK A+VN + GL P AI+ AA E+A+G+ +D FP+ V+QTGSGT SNMN NEVIA+ AA +G +HPND VN SQSSNDTFPT HIAA + LIP L+ LH++L +K++++ VK Sbjct: 34 RAVENFPISGRGLERTQ--IRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAA------KGGVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVK 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_CORGL (Fumarate hydratase class II OS=Corynebacterium glutamicum GN=fumC PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.532e-30 Identity = 77/157 (49.04%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G + +RA G+LK A+VN + G LD AI+ A +E+A GK + FP+ V+QTGSGT SNMN NEVIA+ A K VHPNDHVN QSSNDTFPT H+AA + LIP LKVLH SL K+ E+ VK Sbjct: 34 RAVENFPISGRGLESAQ--IRAMGLLKAACAQVNKDSGALDAEKADAIIAAGKEIASGKHDAEFPIDVFQTGSGTSSNMNTNEVIASIA------KANGVEVHPNDHVNMGQSSNDTFPTATHVAATEAAVNDLIPGLKVLHESLAKKANEWSEVVK 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_PROMM (Fumarate hydratase class II OS=Prochlorococcus marinus (strain MIT 9313) GN=fumC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.919e-30 Identity = 74/159 (46.54%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RSL NF I +RMP ++ A ++K+ AA VN G LD I++AA VA G +D FPL VWQTGSGT +NMN NEVI+N A++ G + VHPNDHVNRSQS+ND FPT +HIAA + L+P L+ L + KS + +K+ Sbjct: 30 RSLLNFAIS--TDRMPVELIHALALIKQAAASVNCRLGVLDEVQRDQIIKAASAVASGLHDDQFPLRVWQTGSGTHTNMNVNEVISNLASQANDEPLGSHRPVHPNDHVNRSQSTNDAFPTAIHIAAVQGITNNLLPELEQLIAAFARKSDAWSDIIKI 186
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_COREF (Fumarate hydratase class II OS=Corynebacterium efficiens GN=fumC PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 7.731e-30 Identity = 77/157 (49.04%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G + +RA G+LK A+VN + G LD A AI+ A +E+A GK + FP+ V+QTGSGT SNMN NEVIA+ A K VHPND VN QSSNDTFPT H+AA + LIP LKVLH SL K+ E+ VK Sbjct: 34 RAVENFPISGRGLESAQ--IRAMGLLKAACAQVNKDSGALDAAKADAIIAAGKEIATGKHDAEFPIDVFQTGSGTSSNMNTNEVIASIA------KANGTEVHPNDDVNMGQSSNDTFPTATHVAATEAAVNDLIPGLKVLHESLAKKANEWDSVVK 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC1_PSEAE (Fumarate hydratase class II 1 OS=Pseudomonas aeruginosa GN=fumC1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.319e-29 Identity = 71/157 (45.22%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R++ NF + G+R MP+ VRA + K AA+ N+ LD +G+AI ++ + HFP+ V+QTGSGT SNMNANEV+A A+ LG K V+PNDHVN QSSND P+ +HI+AA+E + RL+P L+ L ++ SK+ E YVK Sbjct: 28 RAVNNFPVSGQR--MPQAFVRALLLAKAAAARANVSLQQLDAPMGEAIADTCLQLLQEDFMQHFPVDVFQTGSGTSSNMNANEVVATLASRRLGGK-----VNPNDHVNCGQSSNDIIPSTIHISAALEISERLLPALRHLEQTIQSKAGEVHAYVK 177
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_BACSU (Aspartate ammonia-lyase OS=Bacillus subtilis GN=ansB PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 6.544e-29 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+ +NF I G + + E ++ A I+KK AA NM+ L IG+AI+QAA E+ EGK +D F + Q G+GT NMNANEVI NRA EI+GHK+G+ I + PN HVN SQS+ND FPT +HI + ++ +L+ ++ +H+ K+ EF +K+ Sbjct: 32 RASENFPITGYK--IHEEMINALAIVKKAAALANMDVKRLYEGIGQAIVQAADEILEGKWHDQFIVDPIQGGAGTSMNMNANEVIGNRALEIMGHKKGDYIHLSPNTHVNMSQSTNDVFPTAIHI-STLKLLEKLLKTMEDMHSVFKQKAQEFDSVIKM 187
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFT (Fumarate hydratase class II OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fumC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.612e-27 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G MP+ + A G +K AAKVN E GL P ++ K I AA +VA G+ + FP+ ++QTGSGT SNMNANEVIA L + + +HPNDHVN QSSND PT + I+A + RL+P LK L ++ ++ VK Sbjct: 35 RAIENFPISGRS--MPQGFIHALGFIKAAAAKVNAELGLLPKSMAKEIEAAALDVAAGRYDAEFPVDIYQTGSGTSSNMNANEVIAT-----LAMRATKGPIHPNDHVNLGQSSNDVVPTAIRISATLAVQGRLLPALKHLRKMINKRARGLGSVVK 184
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFA (Fumarate hydratase class II OS=Xylella fastidiosa GN=fumC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.612e-27 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 R+++NF I G MP+ + A G +K AAKVN E GL P + K I AA +VA G+ + FP+ ++QTGSGT SNMNANEVIA L + ++ +HPNDHVN QSSND PT + I+A + RL+P LK L ++ ++ VK Sbjct: 35 RAIENFPISGRS--MPQGFIHALGFIKAAAAKVNAELGLLPKPMAKEIEAAALDVAAGRYDADFPVDIYQTGSGTSSNMNANEVIAT-----LAMRATKEPIHPNDHVNLGQSSNDVVPTAIRISATLAVQGRLLPALKHLRKMINKRARGLGSVVK 184
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_PROMA (Fumarate hydratase class II OS=Prochlorococcus marinus GN=fumC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.612e-27 Identity = 69/158 (43.67%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 RSL NF IG +MP ++ + +K AA VN G LD I+ A E++ G ++ FPL VWQTGSGTQ+NMN NEVI+N A+ + G+K G + +HPNDHVNRSQS+ND FP + IA E L+P L L + K +++ +K Sbjct: 29 RSLINFAIG--HNKMPMKLIYSIVQIKASAAIVNCRLGVLDKQRKNFILNACNEISNGMHDEQFPLSVWQTGSGTQTNMNVNEVISNIASHLNGNKLGSHEPLHPNDHVNRSQSTNDVFPAAIQIATVQEILENLLPELDQLIETFDKKIIKWNRIIK 184
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_SULSO (Fumarate hydratase class II OS=Sulfolobus solfataricus GN=fumC PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.105e-27 Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 40 RMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVK 468 + P I+ + G+LKK AKVN + GL D I +I++A+ ++ +GKL+D L V+QTGSGT NMN NEVIA A+ K VHPNDHVN QSSNDT PT + IAA E +RL+P L+ + +SL+ K+ E++ +K Sbjct: 17 KFPRRIIWSMGVLKKSCAKVNADLGLLDKKIADSIIKASDDLIDGKLDDKIVLDVFQTGSGTGLNMNVNEVIAEVASSYSNLK-----VHPNDHVNFGQSSNDTVPTAIRIAAVAEVTNRLLPALQQIISSLNKKAEEYKDVIK 155 The following BLAST results are available for this feature:
BLAST of FC931768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931768 ID=FC931768; Name=FC931768; organism=Citrus clementina; type=EST; length=473bpback to top |