FC931777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931777 vs. ExPASy Swiss-Prot
Match: HMGC2_DANRE (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Danio rerio GN=hmgcll1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.716e-22 Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 1 Query: 442 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLRGLK 696 P +VKIVEVGPRDGLQNEK VPT VK++LI L +GLPV+EATSFVS KWV Q+AD V++ ++ R PVLTPN++G + Sbjct: 40 PVYVKIVEVGPRDGLQNEKEIVPTEVKIQLIDLLSQTGLPVIEATSFVSSKWVAQMADHTAVLKGIKRSPDVRYPVLTPNIQGFQ 124
BLAST of FC931777 vs. ExPASy Swiss-Prot
Match: HMGCL_BACSU (Hydroxymethylglutaryl-CoA lyase yngG OS=Bacillus subtilis GN=yngG PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 442 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLRGLK 696 P+ V I EVGPRDGLQNE + T K+ I +L +GL +E TSFV PKW+P L DA DV + + +G L PN RGL+ Sbjct: 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALVPNQRGLE 88
BLAST of FC931777 vs. ExPASy Swiss-Prot
Match: HMGCL_PSEMV (Hydroxymethylglutaryl-CoA lyase OS=Pseudomonas mevalonii GN=mvaB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 451 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLRGLK 696 VK+ EVGPRDGLQNE+ + +V LI L +GL +EA +FVSP+WVPQ+A + +V+ + +G L PN +G + Sbjct: 4 VKVFEVGPRDGLQNERQPLSVAARVGLIGELAGTGLRHIEAGAFVSPRWVPQMAGSDEVLRQLPSNDGVSYTALVPNRQGFE 85 The following BLAST results are available for this feature:
BLAST of FC931777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931777 ID=FC931777; Name=FC931777; organism=Citrus clementina; type=EST; length=705bpback to top |