FC931784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.802e-22 Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 408 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +ALGN I ND AL R+ + I ++LGVEV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G +G + N Sbjct: 102 KYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGTCMLAN 202 HSP 2 Score: 46.595 bits (109), Expect = 3.802e-22 Identity = 27/70 (38.57%), Postives = 37/70 (52.86%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 RL FENS +GVF T+ L+ G E L +PV++ S+ +RIIG L GN N ++LP Sbjct: 5 RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLATGNSNAIILP 72
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.436e-22 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 3 Query: 408 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G +G + N Sbjct: 102 KYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLAN 202 HSP 2 Score: 46.595 bits (109), Expect = 6.436e-22 Identity = 29/70 (41.43%), Postives = 37/70 (52.86%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 RL FENS +GVF T+ LV G E L +PV++ SI +RIIG L GN N +L+P Sbjct: 5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLATGNSNAILVP 72
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.121e-21 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 3 Query: 402 EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + + +ALGN I ND AL + RE + I D+LGVEV R IAG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ + N Sbjct: 100 QTKYTALGNLILTNDKGALVSSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGSCMLAN 202 HSP 2 Score: 41.5874 bits (96), Expect = 3.121e-21 Identity = 26/70 (37.14%), Postives = 37/70 (52.86%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 +L FENS +GVF T+ L+ G E L +PVV+ S+ +RIIG L GN N +++P Sbjct: 5 KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLGAGNSNAIIVP 72
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.122e-21 Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 405 ERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 ++L+A+GN I ND+ AL + L E + II + L VEV +IAG +VGS + +NRG LVHP S E+LD + +L VP GTVNRG +++GA + N Sbjct: 94 DKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIAN 195 HSP 2 Score: 36.1946 bits (82), Expect = 3.122e-21 Identity = 20/72 (27.78%), Postives = 37/72 (51.39%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLL 373 M + + + +GV + +V+ G +S+ + + L +P++KT I G+ + G L GN NGLL+ Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLI 70
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.280e-21 Identity = 44/103 (42.72%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 402 EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + RL+A GN I ND AL D RE I D+LGV V R IA VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ + N Sbjct: 100 QSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGSCMIAN 202 HSP 2 Score: 43.5134 bits (101), Expect = 5.280e-21 Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 RL FENS +GV+ T+ ++ G E +T L +P+++TS+ +RI+G GN N L++P Sbjct: 5 RLDFENSPYLGVYGFATDRVAVIREGLGEKKLATLREVLK--VPLIETSVMKSRIVGIFVAGNSNALIVP 72
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.966e-20 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + R +ALGN I CND LA L++E + ++D LGVEV ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + GL N Sbjct: 103 VPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVAN 206 HSP 2 Score: 28.8758 bits (63), Expect = 1.966e-20 Identity = 18/71 (25.35%), Postives = 35/71 (49.30%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIG-GSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 +L + +GV+ ++++ L G++ + E + VV+ + G R++G L GN G+LLP Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLP 81
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.323e-20 Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 402 EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGV-EVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G +G+ + N Sbjct: 100 KSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLAN 203 HSP 2 Score: 43.8986 bits (102), Expect = 7.323e-20 Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 RL FENS +GV+ + T+ L+ G E L +P+++TSI +RI+G GN N +++P Sbjct: 5 RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFAAGNSNAIIVP 72
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_NATPD (Translation initiation factor 6 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif6 PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 4.616e-19 Identity = 37/100 (37.00%), Postives = 51/100 (51.00%), Query Frame = 3 Query: 411 LSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 ++A GN + N+ A H DL R+ I + L V V R IA VG+ ++ G L HP T+ E LD L L V GT+N G ++G+GL N Sbjct: 96 INAAGNVVLANNEGAFVHPDLSRDALSAIEEALSVPVERGRIADVQTVGTAAVVTDDGVLSHPKTTDEKLDFLEELFGVYADIGTINYGGPLVGSGLVAN 195 HSP 2 Score: 52.373 bits (124), Expect = 4.616e-19 Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 R S VGVF+ T+ + LV ES S FE EL + V T+I G+ +G L VGN+NGLL+ TD+ Sbjct: 3 RAALSGSSYVGVFATATDEYLLVRPDIEESLQSEFETELD--VTAVPTTIAGSGTVGSLAVGNENGLLVTERVTDR 76
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.995e-19 Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 3 Query: 402 EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + L+A GN I ND AL RE + + D+LGVEV R I VGS +NRGGLVHP + E+L+ L L +V + GT N G +G+ + N Sbjct: 100 QSTLTAFGNLILANDKAALISVKFTREEAKKLEDILGVEVERGMIGDYHAVGSVGVVTNRGGLVHPEATDEELEWLRDLFKVDIYVGTANMGVPFVGSCMLAN 202 HSP 2 Score: 41.5874 bits (96), Expect = 5.995e-19 Identity = 23/70 (32.86%), Postives = 37/70 (52.86%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 +L FENS +GV+ T+ L+ G E L +P+++TSI +RI+G GN N +++P Sbjct: 5 KLDFENSPYLGVYGTATDRVALIREGLGEKKLEVLREVLK--VPLIETSIMKSRIVGVFAAGNSNAIVVP 72
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.003e-19 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 408 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG +N+G LVHP + +++ L L ++P+ GT N G++++G+GL N Sbjct: 93 KLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLAN 193 HSP 2 Score: 33.113 bits (74), Expect = 6.003e-19 Identity = 21/64 (32.81%), Postives = 30/64 (46.88%), Query Frame = 2 Query: 194 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTT 385 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLD--ARIVETLVNGSVVIGALSRGNSNGFLYSYGT 74 The following BLAST results are available for this feature:
BLAST of FC931784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931784 ID=FC931784; Name=FC931784; organism=Citrus clementina; type=EST; length=712bpback to top |