BG732219

Overview
NameBG732219
Unique NameBG732219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length215
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9834 contig Csv1_Contig9834:142..356. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALMA_HALRO (Calmodulin-A OS=Halocynthia roretzi PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.420e-32
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.420e-32
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.420e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 2 
Query:   14 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:    1 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 67
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM2_BRALA (Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 3.420e-32
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM1_BRALA (Calmodulin-1 OS=Branchiostoma lanceolatum PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.420e-32
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM1_BRAFL (Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.420e-32
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 7.619e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+V
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 7.619e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+V
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_ELEEL (Calmodulin OS=Electrophorus electricus GN=calm PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 7.619e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MA+KMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKMKDTDSEEEIREAFRV 92
[Close]
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 9.951e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2 
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRV 92
The following BLAST results are available for this feature:
BLAST of BG732219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CALMA_HALRO3.420e-3292.96Calmodulin-A OS=Halocynthia roretzi PE=1 SV=2[more]
CALMA_ARBPU3.420e-3292.96Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]
CALM2_SOLTU3.420e-32100.00Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=... [more]
CALM2_BRALA3.420e-3292.96Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 ... [more]
CALM1_BRALA3.420e-3292.96Calmodulin-1 OS=Branchiostoma lanceolatum PE=2 SV=... [more]
CALM1_BRAFL3.420e-3292.96Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2[more]
CALM_PLEOS7.619e-3291.55Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_PLECO7.619e-3291.55Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_ELEEL7.619e-3291.55Calmodulin OS=Electrophorus electricus GN=calm PE=... [more]
CALM_HALOK9.951e-3291.55Calmodulin OS=Halichondria okadai PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCs-12d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-12d similar to Calmodulin, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732219 ID=BG732219; Name=BG732219; organism=Citrus sinensis; type=EST; length=215bp
GAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTATGA
GGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCAAT
GAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTAAA
CCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAG
AGGCCTTCCGGGTTT
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