BG732219

Overview
NameBG732219
Unique NameBG732219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length215
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9834 contig Csv1_Contig9834:142..356. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 9.951e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.951e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRV
Sbjct:   11 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRV 81          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.300e-31
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+V
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.300e-31
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.300e-31
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.300e-31
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 1.300e-31
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEV+ADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.300e-31
Identity = 61/71 (85.92%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDGCITT+ELGTVMRSLGQNPTEAELQDM+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRV
Sbjct:   22 KDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 134.42 bits (337), Expect = 1.697e-31
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+V
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.697e-31
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+V
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKV 92          
The following BLAST results are available for this feature:
BLAST of BG732219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CALMB_HALRO9.951e-3291.55Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALMB_ARBPU9.951e-3291.55Calmodulin-beta (Fragment) OS=Arbacia punctulata P... [more]
CALM_STYLE1.300e-3192.96Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_RENRE1.300e-3191.55Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PYUSP1.300e-3191.55Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALM_PATSP1.300e-3191.55Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_MYXGL1.300e-3191.55Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALL3_RAT1.300e-3185.92Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALM_TETPY1.697e-3192.96Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_PROMN1.697e-3192.96Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCs-12d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-12d similar to Calmodulin, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732219 ID=BG732219; Name=BG732219; organism=Citrus sinensis; type=EST; length=215bp
GAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTATGA
GGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCAAT
GAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTAAA
CCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAG
AGGCCTTCCGGGTTT
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