BG732222

Overview
NameBG732222
Unique NameBG732222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12756 contig Csv1_Contig12756:88..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24
Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = -1
Query:  157 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT 402
            NKLEPERK +LA++LGLQPRQVAVWFQNRRARW+TKQLERD+  LKA++DAL+ ++D+L  DN  L  ++  L  KL E+ T
Sbjct:   97 NKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKET 178          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24
Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = -1
Query:  157 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT 402
            NKLEPERK +LA++LGLQPRQVAVWFQNRRARW+TKQLERD+  LKA++DAL+ ++D+L  DN  L  ++  L  KL E+ T
Sbjct:   99 NKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKET 180          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.113e-24
Identity = 59/142 (41.55%), Postives = 85/142 (59.86%), Query Frame = -1
Query:   16 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQ------------NKATLDRNQESDDKQA-ADVAPPTNATAI 402
            NKL+PERK ++A++L L PRQVAVWFQNRRARW+TKQ+ERD+  L++ +DAL+L  D+L+ D +AL  EI +L+ ++     +  +SVK E     E  HQ            N   +D + +SD      + A P +  AI
Sbjct:   85 NKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRV-----DGQMSVKLEAVAADE--HQPPPPPPPPPLAYNSKVVDGSTDSDSSAVFNEEASPYSGAAI 219          

HSP 2 Score: 27.335 bits (59), Expect = 2.113e-24
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = -2
Query:  378 VTVDQVKALEKNFEVETSLSPREK 449
            +  +QV+ALE++FE +  L P  K
Sbjct:   69 LAAEQVRALERSFEADNKLDPERK 92          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.117e-24
Identity = 59/142 (41.55%), Postives = 85/142 (59.86%), Query Frame = -1
Query:   16 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQ------------NKATLDRNQESDDKQA-ADVAPPTNATAI 402
            NKL+PERK ++A++L L PRQVAVWFQNRRARW+TKQ+ERD+  L++ +DAL+L  D+L+ D +AL  EI +L+ ++     +  +SVK E     E  HQ            N   +D + +SD      + A P +  AI
Sbjct:   61 NKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRV-----DGQMSVKLEAVAADE--HQPPPPPPPPPLAYNSKVVDGSTDSDSSAVFNEEASPYSGAAI 195          

HSP 2 Score: 27.335 bits (59), Expect = 2.117e-24
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = -2
Query:  378 VTVDQVKALEKNFEVETSLSPREK 449
            +  +QV+ALE++FE +  L P  K
Sbjct:   45 LAAEQVRALERSFEADNKLDPERK 68          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.284e-24
Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = -1
Query:   13 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTES-NISVKQEETIVHETDHQNKATLDRNQESDDKQAADV--APPTNATAIS 402
            NKLEPERK++LA+ LGLQPRQ+A+WFQNRRARW+TKQLE+DY  LK  +D LK   D LQ  N+ L  EI  LK   N E TES N++ + E +  + +D+           S D    D+  APP+N + ++
Sbjct:  105 NKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK---NREQTESINLNKETEGSCSNRSDN-----------SSDNLRLDISTAPPSNDSTLT 223          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 6.192e-23
Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = -1
Query:   31 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVAPPT 402
            NKLEPERK++LA+ LGLQPRQVA+WFQNRRARW+TKQLE+DY  LK   DA+K   D+L + N+ L  EI  LK +    +   N++ + E +  + +++ ++  LD ++      AA  A PT
Sbjct:  144 NKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGR-EAASELINLNKETEASCSNRSENSSEINLDISRTPPPDAAALDAAPT 266          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 8.088e-23
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = -1
Query:   37 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQ-ESDDKQAADVAP 402
            NKLEPERK++LA+ LGLQPRQVA+WFQNRRARW+TKQLE+DY  LK   DA+K   D+L + N+ L  EI  LK +    +   N++ + E +  + +++ ++  LD ++    D  A D AP
Sbjct:  150 NKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGR-EAASELINLNKETEASCSNRSENSSEINLDISRTPPPDAAALDTAP 271          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 8.088e-23
Identity = 50/123 (40.65%), Postives = 82/123 (66.67%), Query Frame = -1
Query:   37 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIV--HETDHQNKATLDRNQESDDKQAADVAP 399
            +LEP +KV+LA+ELGLQPRQVA+WFQN+RARW++KQLE +Y +L+ NYD L   ++SL+ + +AL+ E++ LK    ++  E       ++ +V    T H+++     N+E+  ++  +V P
Sbjct:   53 RLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESE-----NEENRRRKPEEVRP 170          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.056e-22
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = -1
Query:  151 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTES 399
            KLEP  K +LA+ELGLQPRQVA+WFQN+RARWR+KQ+E DY  L+A YDAL    +SL+ +  AL  ++ EL+ KLNE   +S
Sbjct:   86 KLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQVDELRGKLNERQDQS 168          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.056e-22
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = -1
Query:  151 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTES 399
            KLEP  K +LA+ELGLQPRQVA+WFQN+RARWR+KQ+E DY  L+A YDAL    +SL+ +  AL  ++ EL+ KLNE   +S
Sbjct:   87 KLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQVDELRGKLNERQDQS 169          
The following BLAST results are available for this feature:
BLAST of BG732222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
HOX16_ORYSJ1.474e-2463.41Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX16_ORYSI1.474e-2463.41Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX8_ORYSJ2.113e-2441.55Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX8_ORYSI2.117e-2441.55Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
ATB13_ARATH3.284e-2447.37Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
HOX21_ORYSI6.192e-2345.97Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
HOX21_ORYSJ8.088e-2346.34Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
ATHB7_ARATH8.088e-2340.65Homeobox-leucine zipper protein ATHB-7 OS=Arabidop... [more]
HOX24_ORYSJ1.056e-2257.83Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX24_ORYSI1.056e-2257.83Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCs-1f Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-1f, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732222 ID=BG732222; Name=BG732222; organism=Citrus sinensis; type=EST; length=450bp
GGAAGCAGCTAGAGAAATTGCGGTAGCGTTAGTAGGAGGAGCTACATCGG
CGGCTTGTTTATCATCGCTTTCTTGATTGCGATCGAGAGTGGCTTTGTTT
TGATGATCAGTCTCATGCACAATTGTCTCTTCTTGTTTCACAGAAATATT
GCTCTCCGTGTTCTCTTCATTCAGCTTTGATTTCAGCTCTCTTATCTCTT
TAAGCAAGGCTTCATTGTCGTGTTGGAGGGAGTCATAATTGAGCTTGAGA
GCATCATAATTTGCCTTAAGAACGCCGTAATCTCTTTCAAGTTGCTTGGT
TCTCCAACGAGCGCGTCGGTTTTGGAACCAAACAGCAACTTGTCTTGGCT
GCAGCCCAAGTTCTTGTGCCAACTTCACTTTTCTCTCGGGCTCAAGCTTG
TTTCCACCTCGAAGTTCTTCTCCAAGGCCTTCACCTGATCCACGGTCACT
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