BG732222

Overview
NameBG732222
Unique NameBG732222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12756 contig Csv1_Contig12756:88..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4)

HSP 1 Score: 103.605 bits (257), Expect = 4.014e-22
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = -1
Query:   40 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVA 402
            NKLEPERK++LA+ LGLQPRQ+A+WFQNRRARW+TKQLERDY  LK  +D LK + DSL   N+ L  E+  LK    +E+ +    +K+E     E    N  + + N  ++   A  V+
Sbjct:  135 NKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAK----IKRE---FAEASWSNNGSTENNHNNNSSDANHVS 248          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 5.242e-22
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = -1
Query:   70 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQE 402
            NKLEPERK++LA+ LG+QPRQ+A+WFQNRRARW+T+QLERDY  LK  +++LK +  SL   N+ LL E+  LK   N+E  E NI VK+E       +   + + D N E
Sbjct:  107 NKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK---NKECNEGNI-VKREAEASWSNNGSTENSSDINLE 213          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 6.847e-22
Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = -1
Query:   34 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTE-SNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVAPP 402
            NKLEPERK +LA+ LG+ PRQVAVWFQNRRARW+TKQLE D+  LKA YDAL  ++ +L  DN+ L  ++  L  KL ++ T  S+ ++      V + D   +A       + D   A  APP
Sbjct:  106 NKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAAQEVDQPDEHTEAASTTGFATVD--GALAAPP 227          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 6.847e-22
Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = -1
Query:   34 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTE-SNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVAPP 402
            NKLEPERK +LA+ LG+ PRQVAVWFQNRRARW+TKQLE D+  LKA YDAL  ++ +L  DN+ L  ++  L  KL ++ T  S+ ++      V + D   +A       + D   A  APP
Sbjct:  106 NKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAAQEVDQPDEHTEAASTTGFATVD--GALAAPP 227          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 8.942e-22
Identity = 55/127 (43.31%), Postives = 75/127 (59.06%), Query Frame = -1
Query:   34 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAA-----DVAPP 399
            KLEP  K +LA+ELGLQPRQVA+WFQN+RARWR+KQLE DY  L++ YDAL    +SL+ +  AL  ++ EL+ +L E    S        T    +   N +  +   + DDK+ A     D+ PP
Sbjct:   95 KLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNG--GAATTAASSSSCNGSGSEEVDDDDDKRNAAAGCLDLEPP 219          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 8.942e-22
Identity = 55/127 (43.31%), Postives = 75/127 (59.06%), Query Frame = -1
Query:   34 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAA-----DVAPP 399
            KLEP  K +LA+ELGLQPRQVA+WFQN+RARWR+KQLE DY  L++ YDAL    +SL+ +  AL  ++ EL+ +L E    S        T    +   N +  +   + DDK+ A     D+ PP
Sbjct:   95 KLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNG--GAATTAASSSSCNGSGSEEVDDDDDKRNAAAGCLDLEPP 219          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.525e-21
Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = -1
Query:  166 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNE 399
            KLEP +K++LA+ELGLQPRQVA+WFQN+RARW++KQLER+Y  L+ +YDAL  +Y+SL+ +  AL+K++ +L   L E
Sbjct:   51 KLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQE 128          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.525e-21
Identity = 45/78 (57.69%), Postives = 64/78 (82.05%), Query Frame = -1
Query:  166 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNE 399
            KLEP +K++LA+ELGLQPRQVA+WFQN+RARW++KQLER+Y  L+ +YDAL  +Y+SL+ +  AL+K++ +L   L E
Sbjct:   51 KLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQE 128          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.369e-20
Identity = 39/84 (46.43%), Postives = 64/84 (76.19%), Query Frame = -1
Query:  148 KLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESN 399
            +LEP +KV++A+ELGLQPRQVA+WFQN+RARW+TKQLE++Y  L+ANY+ L   ++ ++ + ++L+ E++ L  ++     E +
Sbjct:   51 RLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKH 134          
BLAST of BG732222 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.435e-19
Identity = 54/127 (42.52%), Postives = 76/127 (59.84%), Query Frame = -1
Query:   22 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWRTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNKATLDRNQESDDKQAADVAPPTNAT 402
            NKLE +RK++LA+ LGLQPRQ+A+WFQNRRAR +TKQLE+DY +LK  +++L+   + LQ  N+ L  ++  LKS+   E+   N     +ET    +D     + D      D Q A   PPT  T
Sbjct:   91 NKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLN-----KETEGSCSDRSENISGDIRPPEIDSQFALGHPPTTTT 212          
The following BLAST results are available for this feature:
BLAST of BG732222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
HAT7_ARATH4.014e-2246.28Homeobox-leucine zipper protein HAT7 OS=Arabidopsi... [more]
ATB20_ARATH5.242e-2250.45Homeobox-leucine zipper protein ATHB-20 OS=Arabido... [more]
HOX5_ORYSJ6.847e-2245.97Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX5_ORYSI6.847e-2245.97Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX22_ORYSJ8.942e-2243.31Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX22_ORYSI8.942e-2243.31Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX6_ORYSJ1.525e-2157.69Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
HOX6_ORYSI1.525e-2157.69Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
ATB12_ARATH8.369e-2046.43Homeobox-leucine zipper protein ATHB-12 OS=Arabido... [more]
ATB23_ARATH2.435e-1942.52Homeobox-leucine zipper protein ATHB-23 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCs-1f Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-1f, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732222 ID=BG732222; Name=BG732222; organism=Citrus sinensis; type=EST; length=450bp
GGAAGCAGCTAGAGAAATTGCGGTAGCGTTAGTAGGAGGAGCTACATCGG
CGGCTTGTTTATCATCGCTTTCTTGATTGCGATCGAGAGTGGCTTTGTTT
TGATGATCAGTCTCATGCACAATTGTCTCTTCTTGTTTCACAGAAATATT
GCTCTCCGTGTTCTCTTCATTCAGCTTTGATTTCAGCTCTCTTATCTCTT
TAAGCAAGGCTTCATTGTCGTGTTGGAGGGAGTCATAATTGAGCTTGAGA
GCATCATAATTTGCCTTAAGAACGCCGTAATCTCTTTCAAGTTGCTTGGT
TCTCCAACGAGCGCGTCGGTTTTGGAACCAAACAGCAACTTGTCTTGGCT
GCAGCCCAAGTTCTTGTGCCAACTTCACTTTTCTCTCGGGCTCAAGCTTG
TTTCCACCTCGAAGTTCTTCTCCAAGGCCTTCACCTGATCCACGGTCACT
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