BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_SYNPX (30S ribosomal protein S9 OS=Synechococcus sp. (strain WH8102) GN=rpsI PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 70/125 (56.00%), Postives = 85/125 (68.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG T YD+ V HGGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYIAAVKAPLETLGLGTEYDILVNVHGGGLTGQSGAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 133
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_PROMP (30S ribosomal protein S9 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rpsI PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 73/125 (58.40%), Postives = 86/125 (68.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L G G+ IN R +YL NP L +K PL+TLG E SYD+FV GGGL+GQA AI G ARAL +S D+R PLK EG L+RD R ERKK GL KARKA Q+SKR Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPSHLNSVKAPLLTLGLENSYDIFVNVFGGGLTGQADAIKQGAARALCGLSPDNRKPLKTEGHLSRDPRSKERKKYGLKKARKAGQFSKR 136
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_GUITH (30S ribosomal protein S9, chloroplastic OS=Guillardia theta GN=rps9 PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 70/124 (56.45%), Postives = 90/124 (72.58%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTG RK AIARV L G+G +N + Y Q +P +++ K PL TLG E Y+++V AHGGGL+GQ +AI LG+ARAL K++ ++R+ LK EG LTRDSR+ ERKK GL KARKAPQ+SKR Sbjct: 11 GTGHRKQAIARVYLTPGSGLIEVNGIKGELYFQYSPNYIRLSKSPLTTLGLENKYNIYVNAHGGGLTGQVEAIRLGLARALCKLNPENRTALKFEGYLTRDSRITERKKYGLKKARKAPQFSKR 134
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_SYNSC (30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9605) GN=rpsI PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31 Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG + YD+ V HGGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPSYIAAVKAPLETLGLSSEYDILVNVHGGGLTGQSGAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 133
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_PORYE (30S ribosomal protein S9, chloroplastic OS=Porphyra yezoensis GN=rps9 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31 Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRKC++A+V L G+G IIN + YLQ +P +L+ PL LG YD+ V A GGGL+GQA AI LGVARAL ++ ++R+ LK EG LTRD RV ERKK GL KARKAPQ+SKR Sbjct: 14 GTGRRKCSVAQVRLVPGSGNLIINGIPGESYLQFSPNYLRVSYAPLQVLGLLNQYDIHVNARGGGLTGQADAIRLGVARALCSINPENRTTLKSEGYLTRDPRVKERKKYGLKKARKAPQFSKR 137
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_PORPU (30S ribosomal protein S9, chloroplastic OS=Porphyra purpurea GN=rps9 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.315e-31 Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRKC++A+V L G+G +IN + YLQ +P +L+ PL LG YD+ V A GGGL+GQA AI LGVARAL ++ ++RS LK EG LTRD +V ERKK GL KARKAPQ+SKR Sbjct: 14 GTGRRKCSVAQVRLVPGSGNLVINGIPGESYLQFSPNYLRVSYAPLQVLGLLNQYDIHVNARGGGLTGQADAIRLGVARALCSINPENRSALKSEGYLTRDPKVKERKKYGLKKARKAPQFSKR 137
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_CYAPA (30S ribosomal protein S9, cyanelle OS=Cyanophora paradoxa GN=rps9 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30 Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 86 GFAAQTI-FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 G QT+ +GTGRRK ++A+V L G G+ +IN + A YLQ N +L +K PL +LG Y+V V GGGL+GQ++AI LG+ARAL ++S HR LK + LTRD+R ERKK GLHKARKAPQYSKR Sbjct: 2 GQKEQTLAYGTGRRKTSVAKVRLIPGKGEILINSKPANLYLQYNLSYLAAVKSPLESLGLANEYNVIVNTQGGGLTGQSEAIRLGLARALCQISLTHRPLLKSDHHLTRDARAKERKKYGLHKARKAPQYSKR 134
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_KOSOT (30S ribosomal protein S9 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.501e-30 Identity = 70/127 (55.12%), Postives = 92/127 (72.44%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIIN---YRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK ++ARV L+ G GKFI+N +D KEYL N W+++ P V +D+F++ GGGLSGQA AI LG+ARALL+ ++D + LK+ GLLTRD+R+VERKK GL KAR+APQ+SKR Sbjct: 9 GTGRRKTSVARVRLRPGEGKFIVNGKELKDLKEYLH-NDAWVRHALKPAVLTDTLGRFDIFIRVSGGGLSGQAGAIRLGIARALLQFNEDLKPLLKQNGLLTRDARIVERKKYGLKKARRAPQFSKR 134
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_OLTVI (30S ribosomal protein S9, chloroplastic OS=Oltmannsiellopsis viridis GN=rps9 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.366e-30 Identity = 69/124 (55.65%), Postives = 83/124 (66.94%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK A+A+V L G GK IIN + +YL N + I+ P + +D VK HGGGLS QA AI LGVARAL +++ HR LK G LTRD+R+VERKKAGL KARKAPQ+SKR Sbjct: 2 GTGRRKRAVAQVKLVAGEGKLIINGKPGFDYLHNNATAILSIQGPFQLFKLQKKFDTIVKVHGGGLSAQADAIKLGVARALCEINTSHRPVLKSNGYLTRDARIVERKKAGLKKARKAPQFSKR 125
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_MYCHJ (30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=rpsI PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.659e-29 Identity = 70/125 (56.00%), Postives = 90/125 (72.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L ++ PL + +++ V AHGGG+SGQA AI LG+ARALLKVS D+R LK G+LTRD+R ERKK GL KAR+A Q+SKR Sbjct: 9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRVNAHGGGISGQAGAIRLGIARALLKVSADYRPGLKVAGMLTRDARAKERKKFGLRKARRARQFSKR 132 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |