BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HAEI8 (30S ribosomal protein S9 OS=Haemophilus influenzae (strain 86-028NP) GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23 Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK + ARV ++ G+GK IN R+ Y G ++ PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQYSKR Sbjct: 7 YGTGRRKSSSARVFIKPGSGKITINQRELDVYF-GRETARMVVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAAGFVTRDARRVERKKVGLHKARRRPQYSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_AZOSB (30S ribosomal protein S9 OS=Azoarcus sp. (strain BH72) GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A+ARV ++ G+G ++N + E+ ++ PLV G E +D+ V GGG SGQA A+ G+ RAL+ S + +S L+ G +TRD+R VERKK GL KAR+A Q+SKR Sbjct: 7 YGTGRRKTAVARVFIKPGSGNIVVNGKPVDEFFS-RETGRMIVRQPLVLTGNEGRFDIMVNVTGGGESGQAGAVRHGITRALIDYSAELKSELRAAGFVTRDAREVERKKVGLRKARRAKQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_XYLFT (30S ribosomal protein S9 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK + ARV L++G+G +N R E+ G ++ PL +++D+ + A GGG +GQA AI LG+ARAL++ + L+K G +TRD R VERKK GLHKAR+A Q+SKR Sbjct: 7 YGTGRRKSSTARVFLRKGSGNISVNGRPLDEFF-GRETARMIVRQPLELTKNVSNFDILITATGGGTTGQAGAIRLGIARALVEYDTSLKPELRKAGFMTRDPREVERKKVGLHKARRATQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_XYLF2 (30S ribosomal protein S9 OS=Xylella fastidiosa (strain M23) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK + ARV L++G+G +N R E+ G ++ PL +++D+ + A GGG +GQA AI LG+ARAL++ + L+K G +TRD R VERKK GLHKAR+A Q+SKR Sbjct: 7 YGTGRRKSSTARVFLRKGSGNISVNGRPLDEFF-GRETARMIVRQPLELTKNVSNFDILITATGGGTTGQAGAIRLGIARALVEYDTSLKPELRKAGFMTRDPREVERKKVGLHKARRATQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_VIBSL (30S ribosomal protein S9 OS=Vibrio splendidus (strain LGP32) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 A +GTGRRK + ARV ++ G+G+ +IN R Y G P +K PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GL KAR+ PQ+SKR Sbjct: 2 AENQYYGTGRRKSSAARVFIKPGSGEIVINKRSLDVYF-GRPTSRMVVKQPLELVELTEKLDLYITVSGGGISGQAGAIRHGITRALMEYDETLRPALRAAGYVTRDARCVERKKVGLRKARRKPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_PASMU (30S ribosomal protein S9 OS=Pasteurella multocida GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 58/125 (46.40%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK + ARV ++ G+GK IN RD Y G ++ PL + D++V GGG+SGQA AI G+ RAL++ + RS L+ G +TRD+R VERKK GL KAR+ PQ+SKR Sbjct: 7 YGTGRRKSSSARVFIKPGSGKITINQRDLDVYF-GRETARMIVRQPLELVEMTEKLDLYVTVKGGGISGQAGAIRHGITRALIEYDESLRSVLRAAGFVTRDARQVERKKVGLRKARRRPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_PARL1 (30S ribosomal protein S9 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G+G+ IN RD + Y P+ + PLV E YD+ GGGLSGQA AI G++RAL R LKKEG LTRDSRVVERKK G KAR++ Q+SKR Sbjct: 39 YATGKRKNAVARVWIKPGSGRVKINGRDLEVYF-ARPVLRMILNQPLVVAAREKQYDITATVVGGGLSGQAGAIRHGISRALTYFEPSLRGVLKKEGFLTRDSRVVERKKYGKAKARRSFQFSKR 162
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LEPCP (30S ribosomal protein S9 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK ++ARV +++GTGK I+N + +EY G + K PL ++D+ V HGGG SGQA A+ GV RAL+ + L G +TRD+R VERKK GLH AR+ Q+SKR Sbjct: 7 YGTGRRKSSVARVFIKKGTGKIIVNGKTVEEYF-GRQTSIMICKQPLFLTNNAEAFDIKVNVHGGGESGQAGAVRHGVTRALIDYDAALKPELSNAGFVTRDAREVERKKVGLHGARRRKQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HYPNA (30S ribosomal protein S9 OS=Hyphomonas neptunium (strain ATCC 15444) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 65/139 (46.76%), Postives = 83/139 (59.71%), Query Frame = 2 Query: 65 VKSRLPGGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 VKS P A +GTGRRK A+ARV ++ G+GK IIN RD + Y P+ I PL+ G T +DV G GL GQA A+ G++RAL+ R+ LK G +TRD RVVERKK G KAR++ Q+SKR Sbjct: 23 VKSVEPKIDAQGRAYGTGRRKEAVARVWIKPGSGKIIINGRDQETYF-ARPVLRMVIAQPLIEAGRATEFDVIATVKGSGLMGQAGAVRHGISRALVAYEPGLRAVLKPFGFMTRDPRVVERKKYGKAKARRSFQFSKR 160
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_DIAST (30S ribosomal protein S9 OS=Diaphorobacter sp. (strain TPSY) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK ++ARV L++G+GK +N +D ++Y G + K PL + ++D+ + HGGG SGQA A G+ RAL+ + L + G +TRD+R VERKK GLH AR+A Q+SKR Sbjct: 8 GTGRRKSSVARVFLKKGSGKITVNGKDIQQYF-GRETSIMIAKQPLALTNHVETFDIQINVHGGGESGQAGAARHGITRALIDYDATLKPALSQAGFVTRDAREVERKKVGLHSARRAKQFSKR 130 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |