BQ622945 | Citrus Genome Database

Overview


Name	BQ622945
Unique Name	BQ622945
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	614

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig8246	contig	Csv1_Contig8246:174..786.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 5.288e-91
Identity = 136/175 (77.71%), Postives = 151/175 (86.29%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPEDI+PL PVGRLVLN+NIDNFFAENE LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MNFMHRDEEVDY PSR+DP R AE+YPIPS V+TGRREK  I KENNFKQ GERYRSWAPDRQ+R +N+W++ L DPR TH
Sbjct:  287 LDVTKTWPEDILPLMPVGRLVLNRNIDNFFAENEQLAFNPGHIVPGVYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRPAEQYPIPSCVLTGRREKCVIPKENNFKQAGERYRSWAPDRQDRYINKWVESLSDPRATH 461

HSP 2 Score: 52.373 bits (124), Expect = 5.288e-91
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKL+IQ ++P+  D+FDFDP
Sbjct:  258 SIAAGNYPEWKLFIQIMNPEDVDKFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.898e-91
Identity = 132/175 (75.43%), Postives = 150/175 (85.71%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P I+VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC + NNH+DG MNFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+R L RW+  L DPR+TH
Sbjct:  287 LDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITH 461

HSP 2 Score: 67.0106 bits (162), Expect = 6.898e-91
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKLYIQTIDPDHED+FDFDP
Sbjct:  258 SIAAGNYPEWKLYIQTIDPDHEDRFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 8.998e-91
Identity = 133/175 (76.00%), Postives = 151/175 (86.29%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P + VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC H NNH+DG MNF+HRDEEV+YFPSR+DPTRHAE+YP+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+R L RW+  L D RVTH
Sbjct:  287 LDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAVTVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGLMNFIHRDEEVNYFPSRFDPTRHAEKYPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTH 461

HSP 2 Score: 62.3882 bits (150), Expect = 8.998e-91
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKL+IQTID DHED+FDFDP
Sbjct:  258 SIAAGNYPEWKLFIQTIDADHEDRFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.851e-89
Identity = 131/175 (74.86%), Postives = 148/175 (84.57%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPEDIIPLQPVGR+VLNKN+DNFFAENE +AF P I VP I+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC H NNH+DGFMNFMHRDEEV+YFPSR+DP RHAE+ PIP  V+T  REK  I+KENNFKQ GERYRS+ P RQ+R + RW+  L  PRVTH
Sbjct:  287 LDVTKTWPEDIIPLQPVGRMVLNKNVDNFFAENEQIAFCPAISVPAIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTH 461

HSP 2 Score: 63.1586 bits (152), Expect = 2.851e-89
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKLYIQTID DHED+FDFDP
Sbjct:  258 SIAAGNYPEWKLYIQTIDLDHEDKFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 3.719e-89
Identity = 132/175 (75.43%), Postives = 149/175 (85.14%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P + VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC H NNH+DG MNF+HRDEEV+YFPSR DPTRHAE+ P+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+R L RW+  L D RVTH
Sbjct:  287 LDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAVTVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAHHNNHHDGLMNFIHRDEEVNYFPSRVDPTRHAEKDPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTH 461

HSP 2 Score: 62.3882 bits (150), Expect = 3.719e-89
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKL+IQTID DHED+FDFDP
Sbjct:  258 SIAAGNYPEWKLFIQTIDADHEDRFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 2.390e-88
Identity = 131/175 (74.86%), Postives = 146/175 (83.43%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPED++PL PVGRLVLN+NIDNFFAENE LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDY PSR+DP R AE+YPIPS V+ GRR    I KENNFKQ GERYRSW PDRQ+R +N+W++ L DPRVTH
Sbjct:  287 LDVTKTWPEDLLPLIPVGRLVLNRNIDNFFAENEQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTH 461

HSP 2 Score: 56.6102 bits (135), Expect = 2.390e-88
Identity = 23/29 (79.31%), Postives = 27/29 (93.10%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKL+IQT+DP+  D+FDFDP
Sbjct:  258 SIAAGNYPEWKLFIQTMDPEDVDKFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 3.118e-88
Identity = 134/175 (76.57%), Postives = 151/175 (86.29%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPEDI+PL PVGRLVLN+NIDNFFAENE LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MNFMHRDEEVDY PSR+DP RHAE+YPIPS V+ GRRE   IEKENNFKQ GERYRSW PDRQ+R +++W++ L DPRVT+
Sbjct:  287 LDVTKIWPEDILPLMPVGRLVLNRNIDNFFAENEQLAFNPGHIVPGLYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLNGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTY 461

HSP 2 Score: 47.3654 bits (111), Expect = 3.118e-88
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIA GNYPEWKL I  +DP+  ++FDFDP
Sbjct:  258 SIAVGNYPEWKLSIHIMDPEDVERFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.410e-87
Identity = 129/177 (72.88%), Postives = 150/177 (84.75%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGL--CDPRVTH 614
            LDVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P I++PGIYYS+DKMLQ R+F+Y D+QRHRLGPNYL LPVNAPK  H NNH++GFMN +HRDEEV+YFPSR+D  RHAER PIP+  ++ RREK  I K+N+FKQ GERYR+WAPDRQER L RW++ L   DPR+TH
Sbjct:  287 LDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIMLPGIYYSDDKMLQTRVFSYADSQRHRLGPNYLQLPVNAPKWSHHNNHHEGFMNAIHRDEEVNYFPSRHDTVRHAERVPIPTTHLSARREKCNIPKQNHFKQAGERYRTWAPDRQERFLRRWVEALSDTDPRITH 463

HSP 2 Score: 62.3882 bits (150), Expect = 3.410e-87
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKLYIQTIDP HED+F+FDP
Sbjct:  258 SIAAGNYPEWKLYIQTIDPAHEDRFEFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 7.569e-87
Identity = 129/175 (73.71%), Postives = 145/175 (82.86%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPED++PL PVGRLVLN+NIDNFFAENE LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDYFPSR+DP R AE+YPIP+ V+ GRR    I KENN KQ GERYRSW  DRQ+R +N+W++ L DPRVTH
Sbjct:  287 LDVTKTWPEDLLPLIPVGRLVLNRNIDNFFAENEQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTH 461

HSP 2 Score: 56.6102 bits (135), Expect = 7.569e-87
Identity = 23/29 (79.31%), Postives = 27/29 (93.10%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKL+IQT+DP+  D+FDFDP
Sbjct:  258 SIAAGNYPEWKLFIQTMDPEDVDKFDFDP 286

[Close]

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 2.192e-86
Identity = 128/175 (73.14%), Postives = 144/175 (82.29%), Query Frame = 3

Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVTH 614
            LDVTK WPED++PL PVGRLVLN+NIDNFFAENE LAFNPG +VPGIYYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDY PSR+DP R AE+YPIP+ V+ GRR    I KENNFKQ GERYRSW  DRQ+R + +W++ L DPRVTH
Sbjct:  287 LDVTKTWPEDLLPLIPVGRLVLNRNIDNFFAENEQLAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTH 461

HSP 2 Score: 56.6102 bits (135), Expect = 2.192e-86
Identity = 23/29 (79.31%), Postives = 27/29 (93.10%), Query Frame = 2

Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            SIAAGNYPEWKL+IQT+DP+  D+FDFDP
Sbjct:  258 SIAAGNYPEWKLFIQTMDPEDVDKFDFDP 286

The following BLAST results are available for this feature:

BLAST of BQ622945 vs. ExPASy Swiss-Prot

BLAST of BQ622945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CATA_CAPAN	5.288e-91	77.71	Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1	[more]
CATA2_ORYSJ	6.898e-91	75.43	Catalase isozyme B OS=Oryza sativa subsp. japonica...	[more]
CATA1_HORVU	8.998e-91	76.00	Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2...	[more]
CATA1_MAIZE	2.851e-89	74.86	Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1	[more]
CATA2_WHEAT	3.719e-89	75.43	Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1	[more]
CATA1_SOLLC	2.390e-88	74.86	Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1...	[more]
CATA2_NICPL	3.118e-88	76.57	Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN...	[more]
CATA_PEA	3.410e-87	72.88	Catalase OS=Pisum sativum PE=2 SV=1	[more]
CATA1_SOLTU	7.569e-87	73.71	Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE...	[more]
CATA2_SOLTU	2.192e-86	73.14	Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_00036 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00036 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>BQ622945 ID=BQ622945; Name=BQ622945; organism=Citrus sinensis; type=EST; length=614bp
CTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTA
TTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACCTGGACGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGGTCCTTAATCGATGGATTAAGGGTTTATGTGACC
CACGTGTCACCCAT