BQ622945

Overview
NameBQ622945
Unique NameBQ622945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:174..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 5.592e-71
Identity = 124/190 (65.26%), Postives = 148/190 (77.89%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRH-AERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCDPRVT 611
            +++ P T        LD TK WPED++PL+PVGRLVL++N+DNFF ENE LAF PG+VVPGIYYS+DKMLQCR+FAY DTQR+RLGPNYLMLPVNAP+C H NNHYDG MNFMHRDEEVDY+PSR+ P R  A   P+P   + GRREKA I K N+FKQPGERYRSW  DRQ+R + R+   L  P+V+
Sbjct:  275 QVMDPDTEEQYDFDPLDDTKTWPEDLLPLRPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVS 464          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.667e-36
Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCD 599
            LD TK WP+  +P + +G++VLNKN+DNFF E E +A  P  +VPGI  S D++LQ R+F+Y DTQ +RLG   L LPVN PK    N + DG +N  H    V+Y PSR +P    ++       ++G  ++A I +E NFKQ G+ +RS++   +  ++ R+ + L D
Sbjct:  299 LDATKIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLFRSYSAKEKTDLVQRFGESLAD 466          

HSP 2 Score: 38.1206 bits (87), Expect = 1.667e-36
Identity = 13/29 (44.83%), Postives = 21/29 (72.41%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G++P+W LY+Q + P+   +FDFDP
Sbjct:  270 AIKKGDFPKWDLYVQVLKPEELAKFDFDP 298          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.180e-35
Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQ 560
            LD TK WP   IP + +G++VLN+N+DNFF E E +A  P  +VPGI  S D++LQ R+FAY DTQ +R+G N L LPVN P+      + DG +N  H    V+Y PSR DP             ++G  ++A I++E NFKQ GE +RS+    Q
Sbjct:  302 LDATKIWPG--IPERKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQ 456          

HSP 2 Score: 38.1206 bits (87), Expect = 5.180e-35
Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G++P+W LYIQ + P+   +FDFDP
Sbjct:  273 AIRKGDFPKWDLYIQVLKPEDLAKFDFDP 301          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 4.288e-34
Identity = 75/169 (44.38%), Postives = 101/169 (59.76%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM-----NFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAP-DRQERVLN 575
            LD TK WP +  P + VG++ LN+N +N FAE E  AF  G++V G+ +S+DKMLQ R F+Y DTQR+R+GPNYL LP+NAPK     N  DG M      F  +D+ V+Y PS    P     R P  +  + G   +A IE+ N F Q G +YR++A  +R E V N
Sbjct:  308 LDDTKIWPREQFPWRHVGQMTLNRNPENVFAETEQAAFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFGQAGMQYRNFADWERDELVSN 476          

HSP 2 Score: 32.7278 bits (73), Expect = 4.288e-34
Identity = 10/29 (34.48%), Postives = 19/29 (65.52%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G++P+W L++Q ++     + DFDP
Sbjct:  279 AIERGDFPQWDLFVQIMEDGEHPELDFDP 307          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.628e-33
Identity = 73/170 (42.94%), Postives = 100/170 (58.82%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGR-REKACIEKENNFKQPGERYRSWA 548
            ++L P    N     LD TK W ED+ P + VG + LN+N DN FAE E + FNPG++VPG+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    Y  P   I G    +   EK NNF    E ++ ++
Sbjct:  262 QVLDPKDLDNYDFNPLDATKDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVPGMLPSEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSINYEPNSYDTEPKENPAYIEPEQEIRGDISGRLVAEKPNNFGHAKEVWKRYS 431          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.728e-32
Identity = 74/173 (42.77%), Postives = 102/173 (58.96%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD------PTRHAERYPIPSDVITGRREKACIEKENNF---KQPGERY 536
            ++L P    +     LD TK W ED+ P + VG + LN+N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG+M F  +   ++Y P+ Y+      P    +   I  D I+GR      EK NNF   K+  +RY
Sbjct:  262 QVLDPKDLDSFDFNPLDATKDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSINYEPNSYETEPKENPAFIEQEQEIRGD-ISGR---LIAEKPNNFGHAKEVWDRY 430          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.317e-31
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACI-EKENNF---KQPGERY 536
            ++L P    +     LD TK W ED+ P + VG + L++N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    +  P   I G      I EK NNF   K+  +RY
Sbjct:  262 QVLDPKDLDSFDFNPLDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRY 430          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.362e-31
Identity = 67/169 (39.64%), Postives = 100/169 (59.17%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFM-----HRDEEVDYFPSRYDPTRHAER-YPIPSDVITGRREKACIEKENNFKQPGERYRSWAP-DRQERVLN 575
            LD TK W +D  P +P+G+LVLNKN +N+ AE E  +F  G++V G+ +S+DK+LQ R FAY DTQR+R+G NYL LP+N+PK     N   G M +       ++  V+Y PS     + A++     +  + G  ++  I++ NNF Q GE YR +   +R E + N
Sbjct:  310 LDPTKLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQAGETYRRFTEFERNELITN 478          

HSP 2 Score: 36.5798 bits (83), Expect = 5.362e-31
Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YPEW++Y Q +  D   + DFDP
Sbjct:  281 AIENGDYPEWEVYAQIMSDDEHPELDFDP 309          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.479e-30
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYP 452
            LD TK  PE+++P+Q VG++VLN+N DNFFAENE  AF+PG +VPG+ ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP+ N   DG    MHR   +D  P+ Y+P    + +P
Sbjct:  354 LDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDG----MHR-MGIDTNPANYEPNSINDNWP 470          

HSP 2 Score: 30.8018 bits (68), Expect = 7.479e-30
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            +I AG++PE++L  Q I  + E +FDFD
Sbjct:  325 AIEAGDFPEYELGFQLIPEEDEFKFDFD 352          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 6.210e-29
Identity = 71/172 (41.28%), Postives = 94/172 (54.65%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE-------------NNFKQPGERYRSWAPDRQERV 569
            DVTK W     PL  VG + LNKN +N+FAE E  AF+P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P      +   A IEKE             + + QPG+ YRS   D +ER+
Sbjct:  279 DVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP------KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERL 444          

HSP 2 Score: 29.6462 bits (65), Expect = 6.210e-29
Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA G++P+WKL IQ +  +   ++ F P
Sbjct:  249 AIARGDFPKWKLSIQVMPEEDAKKYRFHP 277          
The following BLAST results are available for this feature:
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA3_MAIZE5.592e-7165.26Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATB_PSESY1.667e-3641.18Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATB_PSEAE5.180e-3543.95Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_DEIRA4.288e-3444.38Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATA_LISSE4.628e-3342.94Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATA_LISIN8.728e-3242.77Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISMO3.317e-3142.60Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATX_BACSU5.362e-3139.64Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATE_ECOLI7.479e-3049.18Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_HELPY6.210e-2941.28Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00036 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00036 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622945 ID=BQ622945; Name=BQ622945; organism=Citrus sinensis; type=EST; length=614bp
CTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTA
TTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACCTGGACGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGGTCCTTAATCGATGGATTAAGGGTTTATGTGACC
CACGTGTCACCCAT
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