BQ622945

Overview
NameBQ622945
Unique NameBQ622945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:174..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.053e-28
Identity = 67/166 (40.36%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACI-------EKENNFKQPGERYRSWAPDRQERV 569
            DVTK W     PL  VG + LNKN +N+FAE E  AF P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P   +    ++  +       E  + + QPG+ YRS   D +ER+
Sbjct:  279 DVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERL 444          

HSP 2 Score: 29.261 bits (64), Expect = 1.053e-28
Identity = 10/29 (34.48%), Postives = 19/29 (65.52%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA G++P+WK+ IQ +  +   ++ F P
Sbjct:  249 AIAGGDFPKWKMSIQVMPEEDAKKYRFHP 277          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.055e-28
Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 3
Query:   72 NLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 371
            N     LD TK WPE+ +P++ +G++ LN+N+DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  LP+N P CP  NN  DG+
Sbjct:  295 NFDFDVLDPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGY 395          

HSP 2 Score: 32.3426 bits (72), Expect = 1.055e-28
Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            SI  G+YPE++L +Q I  + E  FDFD
Sbjct:  272 SIENGDYPEYELGVQLISEEDEFNFDFD 299          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.917e-28
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLG-PNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRY 422
            LD TK  PE+++P +PVGRLVL++  +NFFAE E +AF    V PGI +S+D +LQ R F+Y DTQ  RLG PN+  LP+NAPKCP ++   DG M   +    V+Y P+ +
Sbjct:  314 LDPTKIIPEEVLPTKPVGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSDDPLLQGRNFSYLDTQLKRLGSPNFTHLPINAPKCPFQHFQQDGHMAMRNPVGRVNYQPNSW 425          

HSP 2 Score: 41.2022 bits (95), Expect = 3.917e-28
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            +I +GN+PEW L++Q  D D  D+FDFD
Sbjct:  285 AIQSGNFPEWDLHVQLFDQDFADKFDFD 312          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.641e-28
Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYD 365
            LD TK  PE+++P++ VGR+VLN+N DNFFAE E +AF+ G VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP  NN  D
Sbjct:  316 LDPTKLVPEELVPVRVVGRMVLNRNPDNFFAETEQVAFHVGHVVPGIDFTNDPLLQGRLFSYTDTQLLRLSGPNFNEIPINRPLCPFHNNQRD 408          

HSP 2 Score: 36.5798 bits (83), Expect = 8.641e-28
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:    5 IAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            I  G+YPEW+L +Q I  + +D FDFD
Sbjct:  288 IEKGDYPEWELGLQVIPENQQDSFDFD 314          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.464e-27
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE----RYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERVLN 575
            LD TK WPED++P++ +G + LN+N D FF + E +AF    VV GI +S+D +LQ R F+Y DTQ  RLG N+  LP+N P CP  N + DG M        V+Y+P+R+D    A      Y   +  + G + +A   K + +F Q    Y S +P  ++ ++N
Sbjct:  318 LDATKIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSHVVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEGGYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMIN 484          

HSP 2 Score: 33.113 bits (74), Expect = 1.464e-27
Identity = 14/28 (50.00%), Postives = 18/28 (64.29%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            +I  G YP+WK  IQ I  + E +FDFD
Sbjct:  289 AIENGAYPKWKFGIQAIAEEDEHKFDFD 316          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.471e-27
Identity = 60/120 (50.00%), Postives = 76/120 (63.33%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRH 437
            DVTK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +    H
Sbjct:  298 DVTKIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEH 414          

HSP 2 Score: 33.8834 bits (76), Expect = 1.471e-27
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA GNYP W  YIQ +     + F F+P
Sbjct:  268 AIATGNYPSWTFYIQVMTFSQAETFPFNP 296          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.906e-27
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 425
            LD TK  PE+++P+ P+G++VLN+N DNFFAE E +AF PG +VPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P  P+ NN  D     +       Y P+  D
Sbjct:  318 LDPTKIIPEELVPVTPLGKMVLNRNPDNFFAEVEQVAFCPGHIVPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHQIPINRPVAPNHNNQRDALHQHVVHKGRASYEPNSID 430          

HSP 2 Score: 33.4982 bits (75), Expect = 1.906e-27
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            +I  G+YPEW+L +Q +    E +FDFD
Sbjct:  289 AIENGDYPEWELGVQIVPEADEHKFDFD 316          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.907e-27
Identity = 56/113 (49.56%), Postives = 72/113 (63.72%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 425
            LD TK  PE++ P+ P+GR+V+++N DNFFAE E +AF    VVPGI +SND +LQ RIF+Y DTQ  RL GPN+  +P+N P CP  NN  DG            YFP+  D
Sbjct:  295 LDPTKLIPEELTPVIPLGRMVIDRNPDNFFAETEQVAFCVSHVVPGIDFSNDPLLQGRIFSYLDTQLSRLGGPNFNEIPINRPVCPFANNQRDGIHRMTINKGGASYFPNSID 407          

HSP 2 Score: 33.4982 bits (75), Expect = 1.907e-27
Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 2
Query:    5 IAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            I +G++P+W+L  Q +D D + +FDFD
Sbjct:  267 IESGDFPQWELGAQLLDEDLQKKFDFD 293          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.493e-27
Identity = 62/132 (46.97%), Postives = 80/132 (60.61%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY-----DPTRHAERYPIPSDV 467
            D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN P K    N   DG M F  ++    +YFP+ +      P     ++ + +DV
Sbjct:  298 DLTKIWPHKDYPLIPVGKLVLNRNPANYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVNCPYKARVANYQRDGPMCFSDNQGGAPNYFPNSFSAPENQPAARESKFRVSADV 429          

HSP 2 Score: 33.4982 bits (75), Expect = 2.493e-27
Identity = 12/29 (41.38%), Postives = 19/29 (65.52%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA GNYP W  YIQ +  +  +++ F+P
Sbjct:  268 AIANGNYPSWTFYIQVMTFEQAERYPFNP 296          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.493e-27
Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 422
            D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  298 DLTKVWPHKDYPLIPVGKLVLNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          

HSP 2 Score: 33.8834 bits (76), Expect = 2.493e-27
Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA+GNYP W  YIQ +     + F F+P
Sbjct:  268 AIASGNYPSWTFYIQVMTFKEAETFPFNP 296          
The following BLAST results are available for this feature:
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_HELPJ1.053e-2840.36Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATE_BACPF1.055e-2852.48Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATE_RHIME3.917e-2849.11Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATE_PSEAE8.641e-2855.91Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CAT1_NEUCR1.464e-2737.72Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATA_CALJA1.471e-2750.00Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATE_PSEPU1.906e-2746.90Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATB_DICDI1.907e-2749.56Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATA_RANRU2.493e-2746.97Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_RAT2.493e-2752.59Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00036 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00036 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622945 ID=BQ622945; Name=BQ622945; organism=Citrus sinensis; type=EST; length=614bp
CTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTA
TTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACCTGGACGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGGTCCTTAATCGATGGATTAAGGGTTTATGTGACC
CACGTGTCACCCAT
back to top