BQ622945

Overview
NameBQ622945
Unique NameBQ622945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:174..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.694e-25
Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERV 569
            D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G       + +N F+QPG+ +R  + D +ER+
Sbjct:  279 DLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERI 445          

HSP 2 Score: 27.7202 bits (60), Expect = 1.694e-25
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YP+WK+YIQ +  +       +P
Sbjct:  249 AIENGDYPKWKMYIQVMTEEQAKNHPDNP 277          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.694e-25
Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERV 569
            D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G       + +N F+QPG+ +R  + D +ER+
Sbjct:  279 DLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERI 445          

HSP 2 Score: 27.7202 bits (60), Expect = 1.694e-25
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YP+WK+YIQ +  +       +P
Sbjct:  249 AIENGDYPKWKMYIQVMTEEQAKNHPDNP 277          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.866e-25
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 422
            D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +
Sbjct:  298 DLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409          

HSP 2 Score: 28.8758 bits (63), Expect = 2.866e-25
Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA   YP W  YIQ +  +  + F F+P
Sbjct:  268 AIATEKYPSWTFYIQVMTFNQAETFPFNP 296          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.868e-25
Identity = 60/163 (36.81%), Postives = 94/163 (57.67%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLN 575
            D+TK WP  ++PL  +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF  ++++   Y P+ YD + +  + Y  P  V+ G  ++      + + QP   +     D++ ++ +
Sbjct:  274 DLTKIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFH 436          

HSP 2 Score: 21.9422 bits (45), Expect = 2.868e-25
Identity = 6/24 (25.00%), Postives = 15/24 (62.50%), Query Frame = 2
Query:   17 NYPEWKLYIQTIDPDHEDQFDFDP 88
            ++P+WK+ +Q +     ++  F+P
Sbjct:  249 DFPKWKVQVQILAEKDIEKLGFNP 272          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.869e-25
Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERV 569
            D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G       + +N F+QPG+ +R  + D +ER+
Sbjct:  279 DLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFAPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERI 445          

HSP 2 Score: 27.7202 bits (60), Expect = 2.869e-25
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YP+WK+YIQ +  +       +P
Sbjct:  249 AIENGDYPKWKMYIQVMTEEQAKNHPDNP 277          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.870e-25
Identity = 63/172 (36.63%), Postives = 95/172 (55.23%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQERVLN 575
            D+TK W +D  PL  VG   LN+N +N+F + E  AF P  +VPG+ +S DKMLQ R+F+YGDTQR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+         +Y  P+  I G+  +     + +N F+QPG+ +R  + + Q+ + N
Sbjct:  276 DLTKVWYKDEYPLIEVGEFELNRNPENYFQDVEQAAFAPTNIVPGLDFSPDKMLQGRLFSYGDTQRYRLGVNHWQIPVNQPKGVGMENICPFSR---DGHMRILDNNQGASTHYYPNSNGAFEDQPQYKKPALDIQGQAYEYDFREDDDNYFEQPGKLFRLLSSEEQQILFN 444          

HSP 2 Score: 28.1054 bits (61), Expect = 2.870e-25
Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTI 52
            +I  GN+P+WK+YIQ +
Sbjct:  246 NIEQGNFPKWKMYIQVM 262          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25
Identity = 67/182 (36.81%), Postives = 93/182 (51.10%), Query Frame = 3
Query:   72 NLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-----DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGLCD 599
            N  +   D+TK WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ R+F+YGD QR+RLG N   +PVN P+CP    H DG M    +      Y P+ Y      P +      +  DV      +     ++ + QPG+ +R    D Q+ +     + + D
Sbjct:  270 NYRINPFDLTKVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRVDGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNERE---YDDDYYSQPGDLFRLMPADEQQLLFENTARAMGD 448          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 524
            DVTK WP    PL  VG++VLN+N  N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT  HRLGPNY+ LPVN   CP+R    N   DG M + ++    ++FP+ ++  +        +   TG  ++     +NN+ QP
Sbjct:  294 DVTKVWPHGDYPLIEVGKMVLNRNPRNYFAEVEQSAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHFHRLGPNYIQLPVN---CPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVKDTTFPATGDVDRYESGDDNNYDQP 438          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.860e-25
Identity = 68/169 (40.24%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP---KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY-DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWI 584
            DVTK W     PL  +GR+VLN+N +N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT RHRLG NY  +PVN P   K   +N   DGFM    +  +  +Y P+ +  P  H E      DV      +      ++F QPG+ YR  + D + R ++  +
Sbjct:  278 DVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLV 446          

HSP 2 Score: 24.6386 bits (52), Expect = 4.860e-25
Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA G  P WK+ IQ ++ +   ++ F+P
Sbjct:  248 TIAKGGEPAWKVSIQLMEFEDALKYRFNP 276          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 6.058e-25
Identity = 70/172 (40.70%), Postives = 94/172 (54.65%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLNRWIKGL 593
            D+TK WP    PL PVG+LVLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  M ++    +Y+P+ +    H               + + +E   +F    +R+ S   D   +V   ++K L
Sbjct:  298 DLTKVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEH---------------QPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVL 451          
The following BLAST results are available for this feature:
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAES1.694e-2538.01Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ1.694e-2538.01Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_PONAB2.866e-2551.30Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_CAMJE2.868e-2536.81Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_STAEP2.869e-2538.01Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]
CATA_STAXY2.870e-2536.63Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_BACFR4.639e-2536.81Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA1_CAEEL4.639e-2543.24Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_DICDI4.860e-2540.24Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_BOVIN6.058e-2540.70Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00036 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00036 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622945 ID=BQ622945; Name=BQ622945; organism=Citrus sinensis; type=EST; length=614bp
CTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTA
TTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACCTGGACGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGGTCCTTAATCGATGGATTAAGGGTTTATGTGACC
CACGTGTCACCCAT
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