BQ622949

Overview
NameBQ622949
Unique NameBQ622949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig444 contig Csv1_Contig444:71..537. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS1_TOBAC (Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.016e-35
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVDVSKISMS E+ LNGPGETY+VTL+EKGTY+FY
Sbjct:    1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDVSKISMSEEEYLNGPGETYSVTLSEKGTYTFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_LACSA (Plastocyanin OS=Lactuca sativa GN=PETE PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.492e-35
Identity = 71/82 (86.59%), Postives = 74/82 (90.24%), Query Frame = 2
Query:  221 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            EVLLG  DG L F PS+FSV+SGEKIVFKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLN PGETYAVTLTEKGTYSFY
Sbjct:    2 EVLLGSSDGGLVFEPSTFSVASGEKIVFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAPGETYAVTLTEKGTYSFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_SOLCR (Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.867e-35
Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            IEVLLG DDG LAFVP +FS+S+GEKI FKNNAGFPHNVVFDEDEIP+GVD SKISM  EDLLN PGETY+VTL+EKGTYSFY
Sbjct:    1 IEVLLGSDDGGLAFVPGNFSISAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVTLSEKGTYSFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_SAMNI (Plastocyanin OS=Sambucus nigra GN=PETE PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.867e-35
Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            +E+LLGG+DGSLAF+PS+FSV SGEKI FKNNAGFPHNVVFDEDE+PSGVD +KISMS +DLLN PGETY+VTLTE GTY FY
Sbjct:    1 VEILLGGEDGSLAFIPSNFSVPSGEKITFKNNAGFPHNVVFDEDEVPSGVDSAKISMSEDDLLNAPGETYSVTLTESGTYKFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_CUCPE (Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.867e-35
Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            IEVLLGGDDGSLAF+P+ FSV++GEKIVFKNNAGFPHNVVFDEDEIPSGVD  KISM+ EDLLN PGE Y V LTEKG+YSFY
Sbjct:    1 IEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEVYKVNLTEKGSYSFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_SOLTU (Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.707e-34
Identity = 67/83 (80.72%), Postives = 77/83 (92.77%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            ++VLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVD SKISM+ EDLLN  GETY+VTL+EKGTY+FY
Sbjct:    1 LDVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMAEEDLLNAAGETYSVTLSEKGTYTFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_MERPE (Plastocyanin OS=Mercurialis perennis GN=PETE PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.707e-34
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            ++VLLG DDG LAFVP++FSV SGEKI FKNNAGFPHNVVFDEDEIPSGVD SKISM   DLLN PGETYAVTLTEKG+YSFY
Sbjct:    1 LDVLLGSDDGELAFVPNNFSVPSGEKITFKNNAGFPHNVVFDEDEIPSGVDASKISMDEADLLNAPGETYAVTLTEKGSYSFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_CUCSA (Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 8.472e-34
Identity = 65/83 (78.31%), Postives = 75/83 (90.36%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            IE+LLGGDDGSLAFVP++F+V+SGEKI FKNNAGFPHNVVFDEDEIPSGVD  KISM+ EDLL+ PG+ Y V LT+KG+YSFY
Sbjct:    1 IEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDSGKISMNEEDLLBAPGZVYZVZLTZKGSYSFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_CAPBU (Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.219e-33
Identity = 68/83 (81.93%), Postives = 71/83 (85.54%), Query Frame = 2
Query:  218 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            IEVLLGG DGSLAFVP+ FS++ GEKIVFKNNAGFPHNVVFDEDEIPSGVD SKISM   DLLN  GETY V LTE GTYSFY
Sbjct:    1 IEVLLGGGDGSLAFVPNDFSIAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDENDLLNAAGETYEVALTEAGTYSFY 83          
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.598e-32
Identity = 73/138 (52.90%), Postives = 88/138 (63.77%), Query Frame = 2
Query:   56 GLKAGATPARVVGSTMKASASAVPKLSIKATLKD-VGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFY 466
            GLKAG  P     S    +  +    S+KA+ K+ +G                  +EVLLGG DGSLAFVPS+  V++GE +VFKNNAGFPHNV+FDEDE+P GVD   ISM  EDLLN PGET++VTL EKGTYS Y
Sbjct:   16 GLKAGRAPTTPSTSIKPPTPMS---FSVKASFKEAIGTALVATAAGAVLASNALAVEVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIY 150          
The following BLAST results are available for this feature:
BLAST of BQ622949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PLAS1_TOBAC2.016e-3584.34Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1[more]
PLAS_LACSA4.492e-3586.59Plastocyanin OS=Lactuca sativa GN=PETE PE=1 SV=1[more]
PLAS_SOLCR5.867e-3583.13Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1[more]
PLAS_SAMNI5.867e-3580.72Plastocyanin OS=Sambucus nigra GN=PETE PE=1 SV=1[more]
PLAS_CUCPE5.867e-3583.13Plastocyanin OS=Cucurbita pepo GN=PETE PE=1 SV=1[more]
PLAS_SOLTU1.707e-3480.72Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=... [more]
PLAS_MERPE1.707e-3483.13Plastocyanin OS=Mercurialis perennis GN=PETE PE=1 ... [more]
PLAS_CUCSA8.472e-3478.31Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1[more]
PLAS_CAPBU3.219e-3381.93Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE... [more]
PLAS_FRIAG1.598e-3252.90Plastocyanin, chloroplastic OS=Fritillaria agresti... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00040 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00040 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622949 ID=BQ622949; Name=BQ622949; organism=Citrus sinensis; type=EST; length=467bp
TACAGTTACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTT
TCACCGGCCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACC
ATGAAGGCCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACT
CAAAGATGTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTG
CTAGCAATGCCATGGCCATTGAGGTTTTGCTTGGTGGTGATGATGGGTCC
TTGGCTTTTGTTCCAAGCTCTTTCTCTGTCAGCTCCGGTGAAAAGATTGT
GTTCAAGAACAATGCTGGGTTCCCACACAACGTTGTTTTCGATGAAGATG
AGATTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAGAAGAC
CTTCTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACTGAAAAAGG
CACTTACTCTTTTTACT
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