BQ622952

Overview
NameBQ622952
Unique NameBQ622952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10231 contig Csv1_Contig10231:504..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12
Identity = 45/154 (29.22%), Postives = 74/154 (48.05%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTH------ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL--LRLPNLIMQHV---DHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            + TR YR+ EV++G G++ P D+WS  C+  EL +G+ LF+ H       + +H+A +  +LG +P H  +      E + RRG              +R + KL    L +++++        A    D L  +L   P +R  A E LRHP+
Sbjct:  538 IQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRG-------------ELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPW 678          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12
Identity = 47/152 (30.92%), Postives = 71/152 (46.71%), Query Frame = 2
Query:   11 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD-------WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   ++++    +   LG      +++ ++    Y     R         +PD     DS               +H    A    DLL  +L  D ++R+   EAL+HP+
Sbjct:  185 YVV-TRYYRAPEVILGMGYQANVDVWSVGCIMAEMVRGSVLFPGSDHIDQWNKVIEQLGTPSQEFMMKLNQSVRTYVENRPRYTGYSFEKLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12
Identity = 46/146 (31.51%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YR+PE+++G   +  P D+W++GC+  EL SG  L+    +++ L ++ + LG L P H  + +     +YF  G ++  P+   + +        L+ PN     + +SA   +  L+G L  DPAERL   + L+HP+F
Sbjct:  162 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS---MNQYF-SGVKIPDPEDMETLE--------LKFPN-----ISYSA---LGFLKGCLHMDPAERLTCEQLLQHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D       WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL+HP+F
Sbjct:  160 YTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKNTFPKWK----PGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D       WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL+HP+F
Sbjct:  160 YTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKNTFPKWK----PGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: YL205_MIMIV (Putative serine/threonine-protein kinase L205 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L205 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12
Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQ------THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR-RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV---DHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            +  R YRAPEVIL L + + CD+WSV C+  EL +G  LF        + +L HL ++E+++G +P  M  ++ RR   + + RG  +   D           +K   L  ++M         A    + L   L  DPA R  A E L+HP+
Sbjct:  395 IQDRRYRAPEVILDLNYTFCCDIWSVACVAYELATGYVLFDPFGEHFLNRDLHHLFLIEKIVGEIPLAMKKKSKRRKFLFDKSRGYHIKNVD----------EFKSTNLETILMNQYLFSKEEAESFANFLMCGLSIDPATRSNADELLKHPW 537          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12
Identity = 44/158 (27.85%), Postives = 73/158 (46.20%), Query Frame = 2
Query:    2 DHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFM 451
            +H Y   + TR YRA EV++G G+  P D+WS  C+  EL +G+ LF+ H+      + +HLA +  +LG +P  +  +     E + + G  L               W L  +     +     A      L+ +L +D  +R  A+ AL+HPF +
Sbjct:  756 NHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIYKKGKHWREFFHKNGHLL--------HIHQLKPWSLYEVLRQKYEWSHEDAQQFESFLRPMLDFDQEKRSTAKIALKHPFLL 905          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: PRP4B_PONAB (Serine/threonine-protein kinase PRP4 homolog OS=Pongo abelii GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12
Identity = 49/161 (30.43%), Postives = 78/161 (48.45%), Query Frame = 2
Query:   11 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW--PDGATSRDSMRAVWKLLRLPNLIMQHVD---------HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFMRDV 460
            Y+VS R YRAPE+I+G  ++Y  D+WSVGC L EL +G+ LF    N   L +   + G +P+ M IR     +++F       +   D  T R+ +  +  +    +L+   +               L DLL  +L  DPA+R+   +AL+H F    +
Sbjct:  849 YLVS-RFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKM-IRKGVFKDQHFDPNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 1007          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12
Identity = 45/151 (29.80%), Postives = 77/151 (50.99%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ + T  YRAPEV+LG   ++ P D+WSVGCI  EL + + LF     ++ L  + ++LG  P+  V                  WP G +   +      W     P+ +   V     D +DLL+ +L+Y+P++R+ A++A+ HP+F
Sbjct:  192 YTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLG-TPNEQV------------------WP-GVSKLPNWHEYPQWN----PSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYF 318          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12
Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG------DLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YRAPE+++G   ++   D+WS+GCI  E+ + + LFQ    ++ L  + R+LG                       L+W +G  S    +A +   R   L  +  D  +G      D   LL+GLL YDPA R+ +++AL HP+F
Sbjct:  172 YTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGT-------------------PTELEW-NGVESLPDYKATFPKWRENFLRDKFYDKKSGNYLMDEDAFSLLEGLLIYDPALRISSKKALHHPYF 306          
The following BLAST results are available for this feature:
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
SRPK2_MOUSE3.485e-1229.22Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
MK08B_CYPCA3.485e-1230.92Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
CDKL1_MOUSE3.485e-1231.51Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
CDC2_RAT3.485e-1231.13Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_MOUSE3.485e-1231.13Cell division control protein 2 homolog OS=Mus mus... [more]
YL205_MIMIV4.552e-1231.37Putative serine/threonine-protein kinase L205 OS=A... [more]
SPK1_CAEEL4.552e-1227.85Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
PRP4B_PONAB4.552e-1230.43Serine/threonine-protein kinase PRP4 homolog OS=Po... [more]
CKB21_ORYSJ4.552e-1229.80Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CDC2_CAEBR4.552e-1230.32Cell division control protein 2 homolog OS=Caenorh... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00043 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00043 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622952 ID=BQ622952; Name=BQ622952; organism=Citrus sinensis; type=EST; length=616bp
GGATCACAGCTATGTTGTATCAACACGACATTATCGTGCACCAGAGGTTA
TTTTAGGCCTTGGATGGAATTATCCTTGTGATTTGTGGAGTGTGGGTTGC
ATTCTTATAGAACTTTGCTCCGGCGAGGCTCTTTTTCAAACGCACGAGAA
TTTAGAGCATCTTGCCATGATGGAGAGGGTTTTAGGGCCTCTCCCCCACC
ATATGGTGATAAGAGCTGACCGCCGTGCTGAGAAATATTTTAGGAGAGGT
GCACGACTGGATTGGCCTGATGGTGCAACTTCGAGAGATAGCATGAGGGC
AGTTTGGAAACTTCTCCGTCTCCCGAACCTGATAATGCAGCATGTAGATC
ACTCTGCCGGTGATTTGATTGATCTCCTTCAGGGGCTCCTCCGATATGAT
CCAGCAGAGCGGCTCAAAGCCAGGGAAGCCCTAAGACATCCTTTCTTCAT
GAGAGATGTGAGAAGGTGTGGCTTTCCCTTGTAATTGCAAAGCCTCGTCT
TTGCTATTGACGAGCTTGTTCAATTTTAGAAAAGAAATAATACACAGCCA
TGCACGTGGGGAATGATATTCTATTGGCTCTTTTTTATACATTGCTGGTT
GATAGTAAAATTATGT
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