BQ622952

Overview
NameBQ622952
Unique NameBQ622952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10231 contig Csv1_Contig10231:504..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12
Identity = 48/151 (31.79%), Postives = 76/151 (50.33%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D  S    WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL HP+F
Sbjct:  160 YTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKSTFPKWK----PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-----RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP--NLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFMR 454
            + +R YRAPEVILG  +  P D+WS+GCIL EL +G  L    +  + LA++  +LG  P   +  A R      ++ Y R       PDG+      R+    +R P  +        + GD   +D L+  L +DP  R+   +AL+H +  R
Sbjct:  622 IQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSKGYPRYCTATSMPDGSVVLAGARSKRGKMRGPPASRSWSTALKNMGDELFVDFLKRCLDWDPETRMTPAQALKHKWLRR 776          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MBK2_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis briggsae GN=mbk-2 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-----RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP--NLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFMR 454
            + +R YRAPEVILG  +  P D+WS+GCIL EL +G  L    +  + LA++  +LG  P   +  A R      ++ Y R       PDG+      R+    +R P  +        + GD   +D L+  L +DP  R+   +AL+H +  R
Sbjct:  621 IQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSKGYPRYCTATSMPDGSVVLAGARSKRGKMRGPPESRSWSTALKNMGDELFVDFLKRCLDWDPETRMTPAQALKHKWLRR 775          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: DYR1A_XENLA (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW-----PDGAT--SRDSMRAVWKLLRLPN-----LIMQHVDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFMR 454
            + +R YR+PEV+LG  ++   D+WS+GCIL+E+ +GE LF     ++ ++ +  VLG  P H++ +A  +A K+F +     W      DG         R +  +L + N            H+  D +   D++  +L YD   R++   AL+H FF +
Sbjct:  314 IQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMSKIVEVLGIPPAHILDQAP-KARKFFEKMPEGTWNLKKTKDGKKEYKPPGTRKLHNILGVENGGPGGRRAGESGHTVADYLKFKDVILRMLDYDAKTRIQPYYALQHSFFKK 473          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR-AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ + T  YRAPEV+LG   ++   D+WSVGCI  EL + +A+F     L+ L  + R+LG  P+  V                  WP  +  +D      WK L L   +  ++D +    +DLL  +L Y+PA+R+ A++A+ HP+F
Sbjct:  180 YTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGT-PNEEV------------------WPGVSKLKDWHEYPQWKPLSLSTAV-PNLDEAG---LDLLSKMLEYEPAKRISAKKAMEHPYF 306          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE+++G   +  P D+W+VGC+  EL SG  L+    +++ L ++ + LG L P H  + +  +    F  G  +  P      +        L+ PNL  Q         + L++G LR DPAERL   + L  P+F
Sbjct:  162 VATRWYRAPELLVGDTQYGPPVDVWAVGCVFAELLSGAPLWPGKSDVDQLYLIRKTLGELIPRHQQVFSTNQ----FFSGVCVPEPQEMEPLE--------LKYPNLSYQ--------ALSLMKGCLRMDPAERLSCEQLLEQPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D       WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL HP+F
Sbjct:  160 YTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKNTFPKWK----PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK14_PANTR (Mitogen-activated protein kinase 14 OS=Pan troglodytes GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12
Identity = 44/146 (30.14%), Postives = 74/146 (50.68%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  + R+ G  P +++ R                      S ++   +  L ++P +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F
Sbjct:  183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAYLINR--------------------MPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK11_MOUSE (Mitogen-activated protein kinase 11 OS=Mus musculus GN=Mapk11 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12
Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF  ++ ++ L  +  V+G P P  +   +   A  Y                     +  L  +P   +  V H A  L IDLL  +L  D  +R+ A EAL H +F
Sbjct:  183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGNDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY---------------------IQSLPPMPQKDLSSVFHGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 308          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12
Identity = 49/149 (32.89%), Postives = 68/149 (45.64%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +S  V T  YR P+V+LG   ++ P D+W VGCIL E+ +G+ LF      E L ++ R+LG                         WP G TS    RA      LP  ++ H      + I+LL  LL Y+   R+ A  AL HP+F
Sbjct:  274 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGKPLFPGSTVKEELHLIFRLLGTPTEE-------------------SWP-GVTSISEFRAYNFPRYLPQPLLSHAPRLDTEGINLLSSLLLYESKSRMSAEAALNHPYF 402          
The following BLAST results are available for this feature:
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CDC2_BOVIN4.552e-1231.79Cell division control protein 2 homolog OS=Bos tau... [more]
MBK2_CAEEL5.945e-1231.61Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEBR5.945e-1231.61Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_XENLA5.945e-1229.19Dual specificity tyrosine-phosphorylation-regulate... [more]
CKB22_ARATH5.945e-1232.00Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDKL1_DANRE5.945e-1232.19Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDC2_PONAB5.945e-1231.13Cell division control protein 2 homolog OS=Pongo a... [more]
MK14_PANTR7.765e-1230.14Mitogen-activated protein kinase 14 OS=Pan troglod... [more]
MK11_MOUSE7.765e-1233.33Mitogen-activated protein kinase 11 OS=Mus musculu... [more]
CDK18_MOUSE7.765e-1232.89Cell division protein kinase 18 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00043 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00043 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622952 ID=BQ622952; Name=BQ622952; organism=Citrus sinensis; type=EST; length=616bp
GGATCACAGCTATGTTGTATCAACACGACATTATCGTGCACCAGAGGTTA
TTTTAGGCCTTGGATGGAATTATCCTTGTGATTTGTGGAGTGTGGGTTGC
ATTCTTATAGAACTTTGCTCCGGCGAGGCTCTTTTTCAAACGCACGAGAA
TTTAGAGCATCTTGCCATGATGGAGAGGGTTTTAGGGCCTCTCCCCCACC
ATATGGTGATAAGAGCTGACCGCCGTGCTGAGAAATATTTTAGGAGAGGT
GCACGACTGGATTGGCCTGATGGTGCAACTTCGAGAGATAGCATGAGGGC
AGTTTGGAAACTTCTCCGTCTCCCGAACCTGATAATGCAGCATGTAGATC
ACTCTGCCGGTGATTTGATTGATCTCCTTCAGGGGCTCCTCCGATATGAT
CCAGCAGAGCGGCTCAAAGCCAGGGAAGCCCTAAGACATCCTTTCTTCAT
GAGAGATGTGAGAAGGTGTGGCTTTCCCTTGTAATTGCAAAGCCTCGTCT
TTGCTATTGACGAGCTTGTTCAATTTTAGAAAAGAAATAATACACAGCCA
TGCACGTGGGGAATGATATTCTATTGGCTCTTTTTTATACATTGCTGGTT
GATAGTAAAATTATGT
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