BQ622952

Overview
NameBQ622952
Unique NameBQ622952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10231 contig Csv1_Contig10231:504..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.324e-11
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YRAPEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WPD  +  D       WK   L + + +++D +    IDLL  +L YDP +R+ AR+A+ HP+F
Sbjct:  160 YTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATKKPLFHGDSEIDQLFRIFRTLGT-PNNEV------------------WPDVESLPDYKNTFPKWKSGNLASTV-KNLDKNG---IDLLTKMLIYDPPKRISARQAMTHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.324e-11
Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YRAPEV+LG + ++ P D+WS+G I  E+ + + LF     ++ L  + R LG  P++ V                  WP+  + +D   +   WK       +  +V +   D +DLL  +L YDPA+R+ AR+AL HP+F
Sbjct:  160 YTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKNSFPKWK----GGSLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11
Identity = 43/158 (27.22%), Postives = 73/158 (46.20%), Query Frame = 2
Query:    2 DHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFM 451
            +H Y   + TR YRA EV++G G+  P D+WS  C+  EL +G+ LF+ H+      + +HLA +  +LG +   +  +     E + + G  L   +           W L  +     +     A      L+ +L +D  +R  A +AL+HPF +
Sbjct:  535 NHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPHQGDNYSRDEDHLAHISELLGQISPSIYKKGKHWREFFHKNGNLLHIHN--------LKPWSLYEVLRQKYEWSHEDAQQFESFLRPMLDFDQEKRATANDALKHPFLL 684          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_WALSE (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia sebi GN=HOG1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11
Identity = 42/145 (28.97%), Postives = 76/145 (52.41%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    ++   D+WSVGCI  E+  G  +F   +++  L ++  +LG  P  ++                    +  TS ++ R V  L +   +   Q   +++ + IDLL+ +L ++P ER+ A +A++HP+
Sbjct:  109 VSTRYYRAPEIMLTWQEYDSAVDIWSVGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVI--------------------NTITSENTRRFVDALPKREKIPFQQRFPNASEEEIDLLEKMLDFNPKERITAADAIQHPY 233          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11
Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++   T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D       WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL HP+F
Sbjct:  160 YTHEAITLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKNTFPKWK----PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11
Identity = 45/154 (29.22%), Postives = 77/154 (50.00%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+  E      + +H+A +  +LG LP ++ +R  +    +F             SR  +R + KL   P  +++ +    S   A ++ D L  +L+ DP +R  A   + HP+
Sbjct:  565 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPW 705          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MPKC_ASPOR (Mitogen-activated protein kinase mpkC OS=Aspergillus oryzae GN=mpkC PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS-AGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    +    D+WS GCIL E+  G+ LF   +++    ++  VLG  P  +V +                     TS ++ R V  L       ++ V H    D+I LL+ LL +DP +RL A  AL+HP+
Sbjct:  173 VSTRYYRAPEIMLTWQRYGKMVDIWSAGCILAEMLRGKPLFPGKDHIHQFFLITEVLGNPPPEVVQK--------------------ITSGNTQRVVNSLPNQEPRPLRAVFHEFDNDVISLLEQLLLFDPDKRLTAETALQHPY 297          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK14B_DANRE (Mitogen-activated protein kinase 14B OS=Danio rerio GN=mapk14b PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11
Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  + R+ G  P  ++ R                      S ++   +  L  +P      V   A  L +DLL+ +L  D  +R+ A +AL HP+F
Sbjct:  184 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASLISR--------------------MPSHEARNYISSLPHMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASQALAHPYF 309          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK14A_DANRE (Mitogen-activated protein kinase 14A OS=Danio rerio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11
Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  + R+ G  P  ++ R                      S ++   +  L ++P      V   A    +DLL+ +L  D  +R+ A EAL HP+F
Sbjct:  184 VATRWYRAPEIMLNWMHYNVTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPSSLISR--------------------MPSHEARTYISSLPQMPKRNFADVFIGANPQAVDLLEKMLVLDTDKRITAAEALAHPYF 309          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK14A_CYPCA (Mitogen-activated protein kinase 14A OS=Cyprinus carpio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11
Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  + R+ G  P  ++ R                      S ++   +  L ++P      V   A    +DLL+ +L  D  +R+ A EAL HP+F
Sbjct:  184 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASLISR--------------------MPSHEARTYINSLPQMPKRNFSEVFIGANPQAVDLLEKMLVLDTDKRITAAEALAHPYF 309          
The following BLAST results are available for this feature:
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CDC2_CARAU1.324e-1132.45Cell division control protein 2 homolog OS=Carassi... [more]
CDC2A_XENLA1.324e-1131.79Cell division control protein 2-A OS=Xenopus laevi... [more]
SPK1_CAEBR1.730e-1127.22Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
HOG1_WALSE1.730e-1128.97Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
CDC2_HUMAN1.730e-1130.46Cell division control protein 2 homolog OS=Homo sa... [more]
SKY1_YEAST2.259e-1129.22Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
MPKC_ASPOR2.259e-1133.10Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MK14B_DANRE2.259e-1130.82Mitogen-activated protein kinase 14B OS=Danio reri... [more]
MK14A_DANRE2.259e-1130.82Mitogen-activated protein kinase 14A OS=Danio reri... [more]
MK14A_CYPCA2.259e-1130.82Mitogen-activated protein kinase 14A OS=Cyprinus c... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00043 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00043 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622952 ID=BQ622952; Name=BQ622952; organism=Citrus sinensis; type=EST; length=616bp
GGATCACAGCTATGTTGTATCAACACGACATTATCGTGCACCAGAGGTTA
TTTTAGGCCTTGGATGGAATTATCCTTGTGATTTGTGGAGTGTGGGTTGC
ATTCTTATAGAACTTTGCTCCGGCGAGGCTCTTTTTCAAACGCACGAGAA
TTTAGAGCATCTTGCCATGATGGAGAGGGTTTTAGGGCCTCTCCCCCACC
ATATGGTGATAAGAGCTGACCGCCGTGCTGAGAAATATTTTAGGAGAGGT
GCACGACTGGATTGGCCTGATGGTGCAACTTCGAGAGATAGCATGAGGGC
AGTTTGGAAACTTCTCCGTCTCCCGAACCTGATAATGCAGCATGTAGATC
ACTCTGCCGGTGATTTGATTGATCTCCTTCAGGGGCTCCTCCGATATGAT
CCAGCAGAGCGGCTCAAAGCCAGGGAAGCCCTAAGACATCCTTTCTTCAT
GAGAGATGTGAGAAGGTGTGGCTTTCCCTTGTAATTGCAAAGCCTCGTCT
TTGCTATTGACGAGCTTGTTCAATTTTAGAAAAGAAATAATACACAGCCA
TGCACGTGGGGAATGATATTCTATTGGCTCTTTTTTATACATTGCTGGTT
GATAGTAAAATTATGT
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