BQ622952

Overview
NameBQ622952
Unique NameBQ622952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10231 contig Csv1_Contig10231:504..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_PICST (Mitogen-activated protein kinase HOG1 OS=Pichia stipitis GN=HOG1 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11
Identity = 47/148 (31.76%), Postives = 73/148 (49.32%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR---LP-NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    ++   DLWSVGCIL E+  G+ LF   +++   +++  +LG  P  ++                    D   S +++R V  L     +P N       H   + IDLL  +L +DP +R+ A  AL HP+
Sbjct:  177 VSTRYYRAPEIMLTWQKYDTEVDLWSVGCILAEMIEGKPLFPGKDHVHQFSIITELLGSPPPDVI--------------------DTICSENTLRFVQSLPHRDPIPFNERFAQCTHVEPEAIDLLAKMLIFDPKKRISAASALTHPY 304          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_ASHGO (Mitogen-activated protein kinase HOG1 OS=Ashbya gossypii GN=HOG1 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11
Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    +N   D+WS GCI  E+  G+ LF   +++   +++  +LG  P  ++                    D   S ++++ V  L  R P    +   +   D +DLL+ +L +DP +R+ A +AL HP+
Sbjct:  177 VSTRYYRAPEIMLTWQKYNVEVDIWSAGCIFAEMIEGKPLFPGKDHVHQFSIITDLLGSPPKDVI--------------------DTICSENTLKFVTSLPHRDPVPFTERFKNLKPDAVDLLEKMLVFDPKKRITAGDALTHPY 301          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5)

HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11
Identity = 43/146 (29.45%), Postives = 75/146 (51.37%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YR+PE+++G   +  P D+W++GC+  EL SG  L+    +++ L ++ + LG L P H  + +     +YF  G ++  P+     +        L+ PN+        +   + LL+G L  DP +RL   + L HP+F
Sbjct:  162 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS---TNQYF-SGVKIPDPEDMEPLE--------LKFPNI--------SYPALGLLKGCLHMDPTQRLTCEQLLHHPYF 287          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HOG1_WALMU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia muriae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11
Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    ++   D+WS+GCI  E+  G  +F   +++  L ++  +LG  P  ++                    +  TS ++ R V  L +   +   Q   ++  + IDLL+ +L ++P ER+ A +A++HP+
Sbjct:  109 VSTRYYRAPEIMLTWQEYDSAVDIWSIGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVI--------------------NTITSENTRRFVDALPKREKIPFQQRFPNANEEEIDLLEKMLDFNPKERITAADAIQHPY 233          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11
Identity = 47/169 (27.81%), Postives = 78/169 (46.15%), Query Frame = 2
Query:    8 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA-------RLDWPD------GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL----------IDLLQGLLRYDPAERLKAREALRHPF 445
            S  + +R+YRAPE+ILGL +    D+WS+GC++ EL  G  L+      + +  + +  G LP   ++ A  +  ++F R         RL  PD      G  S+++ + ++  L     +    D    D+          IDLL+ +L  D  +R+   E L HPF
Sbjct:  359 STYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQG-LPAEYLLSAGTKTTRFFNRDTDSPYPLWRLKTPDDHEAETGIKSKEARKYIFNCLDDMAQVSMTTDLEGSDMLVEKADRREFIDLLKKMLTIDADKRITPIETLNHPF 526          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: ERK1_DICDI (Extracellular signal-regulated kinase 1 OS=Dictyostelium discoideum GN=erkA PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLGWNY---PCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPEVIL   WN      D+WSVGCI  EL   + LFQ  + +  + ++   +G P    +   A+ +A ++ R                      +   P +   ++   A  D IDLL+ +L +DP++RL   EAL HP+F
Sbjct:  312 VATRWYRAPEVILS--WNKYTKAIDIWSVGCIFAELLGRKPLFQGKDYIHQITLIIETIGSPSEEDICNIANEQARQFIR---------------------NMGNQPKVNFANMFPKANPDAIDLLERMLYFDPSKRLTVEEALAHPYF 437          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11
Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 2
Query:    5 HSYVVSTRHYRAPEVILGLGWNYPC--DLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 448
            +++ V T  YRAPE++LG G  Y    D+WSVGCI  E+C+ + LF     ++ +  + R+LG  P+  +                  WPD     D   +  +  + P  + + V     + IDLL  +L YDP+ R+ A+ AL HP+F
Sbjct:  165 YTHEVVTLWYRAPEILLG-GKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILG-TPNEEI------------------WPDVNYLPDFKSSFPQWKKKP--LSEAVPSLDANGIDLLDQMLVYDPSRRISAKRALIHPYF 292          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MPKC_ASPCL (Mitogen-activated protein kinase mpkC OS=Aspergillus clavatus GN=mpkC PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   17 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-----LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            VSTR+YRAPE++L    +    D+WS GCIL E+  G+ LF   +++    ++  +LG  P  ++                    +  TS+++M+ V  L       L  ++ +  D    D IDLL+ +L  DP  R+ A++ALRHP+
Sbjct:  174 VSTRYYRAPEIMLTWQRYGVQVDIWSAGCILAEMLRGKPLFPGKDHVHQFHLITNILGNPPKSVL--------------------EKITSKNTMKFVQSLPSREPRDLSTIVPKDTDF---DAIDLLKKMLVIDPDIRVSAQDALRHPY 299          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK14B_CYPCA (Mitogen-activated protein kinase 14B OS=Cyprinus carpio GN=mapk14b PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 44/146 (30.14%), Postives = 71/146 (48.63%), Query Frame = 2
Query:   17 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFF 448
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  + R+ G  P  ++ R                      S ++   +  L  +P      V   A  + +DLL+ +L  D  +R+ A +AL HP+F
Sbjct:  184 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASLISR--------------------MPSHEARNYINSLSYMPKRNFADVFVGANPMAVDLLEKMLVLDTDKRITASQALAHPYF 309          
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11
Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = 2
Query:   11 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 445
            YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   LG P P  M      V        KY        +PD     DS               +H    A    DLL  +L  DPA+R+   +AL+HP+
Sbjct:  223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358          
The following BLAST results are available for this feature:
BLAST of BQ622952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
HOG1_PICST3.854e-1131.76Mitogen-activated protein kinase HOG1 OS=Pichia st... [more]
HOG1_ASHGO3.854e-1129.66Mitogen-activated protein kinase HOG1 OS=Ashbya go... [more]
CDKL1_HUMAN3.854e-1129.45Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=... [more]
HOG1_WALMU5.033e-1128.28Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HIPK2_MESAU5.033e-1127.81Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
ERK1_DICDI5.033e-1132.21Extracellular signal-regulated kinase 1 OS=Dictyos... [more]
CDC28_CANAL5.033e-1131.33Cell division control protein 28 OS=Candida albica... [more]
MPKC_ASPCL6.573e-1130.87Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MK14B_CYPCA6.573e-1130.14Mitogen-activated protein kinase 14B OS=Cyprinus c... [more]
MK10_RAT6.573e-1133.55Mitogen-activated protein kinase 10 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00043 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00043 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622952 ID=BQ622952; Name=BQ622952; organism=Citrus sinensis; type=EST; length=616bp
GGATCACAGCTATGTTGTATCAACACGACATTATCGTGCACCAGAGGTTA
TTTTAGGCCTTGGATGGAATTATCCTTGTGATTTGTGGAGTGTGGGTTGC
ATTCTTATAGAACTTTGCTCCGGCGAGGCTCTTTTTCAAACGCACGAGAA
TTTAGAGCATCTTGCCATGATGGAGAGGGTTTTAGGGCCTCTCCCCCACC
ATATGGTGATAAGAGCTGACCGCCGTGCTGAGAAATATTTTAGGAGAGGT
GCACGACTGGATTGGCCTGATGGTGCAACTTCGAGAGATAGCATGAGGGC
AGTTTGGAAACTTCTCCGTCTCCCGAACCTGATAATGCAGCATGTAGATC
ACTCTGCCGGTGATTTGATTGATCTCCTTCAGGGGCTCCTCCGATATGAT
CCAGCAGAGCGGCTCAAAGCCAGGGAAGCCCTAAGACATCCTTTCTTCAT
GAGAGATGTGAGAAGGTGTGGCTTTCCCTTGTAATTGCAAAGCCTCGTCT
TTGCTATTGACGAGCTTGTTCAATTTTAGAAAAGAAATAATACACAGCCA
TGCACGTGGGGAATGATATTCTATTGGCTCTTTTTTATACATTGCTGGTT
GATAGTAAAATTATGT
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