BQ622955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.391e-30 Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 E VWFK GA + L+Y G I N+V + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRLAMF+ GFF+QA VTG+GP++NLA HL+DP NN Sbjct: 118 EPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNN 244
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.391e-30 Identity = 69/127 (54.33%), Postives = 90/127 (70.87%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L+Y G ++ + A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 129 EAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.391e-30 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L+Y G I+ + A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 118 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 244
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.123e-30 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L+Y G I+ + A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+ P NN Sbjct: 125 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.123e-30 Identity = 66/127 (51.97%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L+Y G ++ + ++ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP++ A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 126 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.079e-30 Identity = 69/127 (54.33%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L Y G ++ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA D + FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 126 EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.327e-30 Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP++NL H++DP ANN Sbjct: 127 EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.187e-29 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EA WFK G+ + L+Y G I+ + A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL++P NN Sbjct: 107 EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.550e-29 Identity = 67/127 (52.76%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 381 EAVWFK G+ + L+Y G ++ + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+ P+ FA LKVKE+KNGRLAMF+M GFF+ A VTG+GP+ENLA HL+DP NN Sbjct: 90 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.644e-29 Identity = 69/138 (50.00%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 16 EAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNVER 414 EAVW K G+ + L+Y G ++ + A+ A +++L+G E YR+ G + D L+PGG FDPLGLA+DP+ FA LKVKE KNGRLAMF+M GFF+QA VTG+GP+ENLA HL DP NN + + V R Sbjct: 129 EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPR 266 The following BLAST results are available for this feature:
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622955 ID=BQ622955; Name=BQ622955; organism=Citrus sinensis; type=EST; length=456bpback to top |