BQ622955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20 Identity = 54/129 (41.86%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 25 WFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 405 W G + L+DG++ Y G+ +P ++ + E++++G E+ R LD E +L+PGG F DPLGLA DP + A L++ EIK+ RLAM LGF +QA TG+GP+ N A HLSDP ++ S + Sbjct: 162 WQDAGKVELVDGSS--YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.239e-19 Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 25 WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 390 WF+TG + G T NY+ N + + E+ L+G AE+ R + L LE + +PGGPF +PLG KD LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL H++DP NN+LT Sbjct: 136 WFQTGVIPPAG-TYNYWADNYTL-----FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLT 270
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.032e-17 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 25 WFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 351 W G + L++G++ Y G+ +P +L + E+++VG E+ R + LD E +++PGG FDPLGLA DP++ LK+ EIK+ RLAM A L F LQA TG+GPV LA Sbjct: 166 WQDAGKVELVEGSS--YLGQPLPFSLTTLIWIEVLVVGYIEFQR-NSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLA 272
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 1.965e-16 Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 25 WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 354 W + G + LDG +Y G ++P ++ + E++LVGGAE+YR + + E + +PGG FDPL LA + ++ A LK EIK+ RLAM + G+ +QA TGEG + +LAK Sbjct: 162 WVEAGKVELDG--ASYAGLSLPFSITQLIWIEVILVGGAEFYR-NSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLAK 269
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.917e-13 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 187 HPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 405 +PGG F+PL A + K KEI NGRLAM A LGF +Q VTG+GP +NL +H+SDP+ N ++ + GN Sbjct: 184 YPGGIFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 187 HPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 387 +PGG F+PL A P Q A K KE+ NGRLAM A LGF +Q VTG+GP ENL +HLSDP+ N ++ Sbjct: 185 YPGGIFNPLNFA--PTQEA--KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 187 HPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 402 +PG F+PL A + K KE+ NGRLAM A LGF +Q V G+GP ENL +HL+DP+ N ++ ISG Sbjct: 164 YPGRVFNPLNFAPLEN-----KEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 44/104 (42.31%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 112 IAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGGP-FDPLGLAK-DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 369 I E+VL+G AE R N L D +PGG FDPLG P + L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP Sbjct: 155 IVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 The following BLAST results are available for this feature:
BLAST of BQ622955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622955 ID=BQ622955; Name=BQ622955; organism=Citrus sinensis; type=EST; length=456bpback to top |